SMTB2024 - Lab 11

How to get the code

Copy the following command and paste it into your terminal:

git clone git@github.com:kalininalab/SMTB2024.git

Then press "ENTER" and wait until the download is complete. Now you have a folder called SMTB2024 with all the code.

How to set up Python

On the Jupyter Server, Python and Conda are already installed. You can install all packages you need for the lab by running the following in your terminal:

pip install -r requirements.txt

In case you need a new package package_name, you can install it by running:

pip install package_name

A list of package can be found here: https://pypi.org/.

Working with git

Git is a Version Control System (VCS) that allows you to keep track of changes in your code. You can use it to collaborate with others. The two main actions are updating your local repository and updating the online repository.

Updating your local repository

To update your local repository, you need to pull the changes from the online repository. You can do this by running:

git pull

Updating the online repository

To update the online repository, you need to commit your changes and push them to the online repository. You can do this by running:

git add .
git commit -m "Your commit message"
git push

If your have problems, questions, or feel unsafe, please ask one of the faculty members for help.