Codes written at UC Merced by and for the Isborn research group. Most are compatible with python3.x
scripts/
: these mostly interface with theGaussian
program. There are some standalone codes for running TDCI calculations as well.ML/
: these codes are written usingtensorflow
andpytorch
libraries (to simulate deep, feed-forward static neural networks for time-series analysis). Inspired and modified by@hbhat4000
examples/
: this directory contains example computations run using the scripts and codes stored in the above folder(s).examples/TDCI
refers to an example of a TDCI on the LiH molecule using the STO-3G basis set. This starts with using the configuration interaction scripts,calc_tdm_cis_latest.ipynb
andcalc_tdm_casscf_latest.ipynb
, to extract data from CIS and CASSCF calculation.log
files (produced by Gaussian DV), respectively, and storing the data intdm_tdci.txt
and CI density matrices in a series of.npz
files, and then running the time-dependent configuration interaction script,TDCI_1pulse_latest_compact.ipynb
, which readstdm_tdci.txt
and using the CI density matrix.npz
files to calculate electron dynamics.