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  • New York, NY

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Achievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx2

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Achievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx2
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  1. FunctionLab/selene FunctionLab/selene Public

    a framework for training sequence-level deep learning networks

    Jupyter Notebook 371 87

  2. FunctionLab/HeartENN-models FunctionLab/HeartENN-models Public

    Documentation and scripts to run HeartENN (Richter et al., 2020)

    Python 1 2

  3. greenelab/PathCORE-T greenelab/PathCORE-T Public

    Methods to build a network of pathway co-occurrence relationships out of expression signatures extracted from transcriptomic compendia.

    Python 4 3

  4. greenelab/PathCORE-T-analysis greenelab/PathCORE-T-analysis Public

    This repository is in support of the PathCORE-T paper (https://doi.org/10.1101/147645). It contains all the code and necessary data/metadata to repeat all analyses in the paper.

    Jupyter Notebook 7 2

  5. crosstalk-correction crosstalk-correction Public

    Python implementation of Donato et al. (2013)'s maximum impact estimation. A pre-processing step to pathway analysis.

    Python 1