Pinned

1. hogwash Public

   Three bacterial GWAS methods all rolled into one easy-to-use R package

   R 15 2

2. simulate_data_for_convergence_based_bGWAS Public

   Simulation of genotype and phenotype data to benchmark hogwash, a convergence based bacterial genome-wide association study (bGWAS) method

   R 1

3. Snitkin-Lab-Umich/prewas Public

   R package to perform data pre-processing for more informative bacterial GWAS

   R 4 3

4. clinical_cdifficile_trehalose_variants Public

   Analysis of association between trehalose utilization variants in clinical C. difficile isolates and infection severity

   R 1

5. cdifficile_gwas Public

   GWAS on C. difficile

   R