forked from NOAA-GSL/global-workflow
-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge branch 'NOAA-EMC:develop' into develop
- Loading branch information
Showing
109 changed files
with
2,285 additions
and
2,085 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,198 @@ | ||
| def Machine = 'none' | ||
| def machine = 'none' | ||
| def HOME = 'none' | ||
| def localworkspace = 'none' | ||
| def commonworkspace = 'none' | ||
|
|
||
| pipeline { | ||
| agent { label 'built-in' } | ||
|
|
||
| options { | ||
| skipDefaultCheckout() | ||
| parallelsAlwaysFailFast() | ||
| } | ||
|
|
||
| stages { // This initial stage is used to get the Machine name from the GitHub labels on the PR | ||
| // which is used to designate the Nodes in the Jenkins Controler by the agent label | ||
| // Each Jenknis Node is connected to said machine via an JAVA agent via an ssh tunnel | ||
|
|
||
| stage('Get Machine') { | ||
| agent { label 'built-in' } | ||
| steps { | ||
| script { | ||
| localworkspace = env.WORKSPACE | ||
| machine = 'none' | ||
| for (label in pullRequest.labels) { | ||
| echo "Label: ${label}" | ||
| if ((label.matches('CI-Hera-Ready'))) { | ||
| machine = 'hera' | ||
| } else if ((label.matches('CI-Orion-Ready'))) { | ||
| machine = 'orion' | ||
| } else if ((label.matches('CI-Hercules-Ready'))) { | ||
| machine = 'hercules' | ||
| } | ||
| } // createing a second machine varible with first letter capital | ||
| // because the first letter of the machine name is captitalized in the GitHub labels | ||
| Machine = machine[0].toUpperCase() + machine.substring(1) | ||
| } | ||
| } | ||
| } | ||
|
|
||
| stage('Get Common Workspace') { | ||
| agent { label "${machine}-emc" } | ||
| steps { | ||
| script { | ||
| properties([parameters([[$class: 'NodeParameterDefinition', allowedSlaves: ['built-in', 'Hera-EMC', 'Orion-EMC'], defaultSlaves: ['built-in'], name: '', nodeEligibility: [$class: 'AllNodeEligibility'], triggerIfResult: 'allCases']])]) | ||
| HOME = "${WORKSPACE}/TESTDIR" | ||
| commonworkspace = "${WORKSPACE}" | ||
| sh(script: "mkdir -p ${HOME}/RUNTESTS") | ||
| pullRequest.addLabel("CI-${Machine}-Building") | ||
| if (pullRequest.labels.any { value -> value.matches("CI-${Machine}-Ready") }) { | ||
| pullRequest.removeLabel("CI-${Machine}-Ready") | ||
| } | ||
| } | ||
| } | ||
| } | ||
|
|
||
| stage('Build System') { | ||
| matrix { | ||
| agent { label "${machine}-emc" } | ||
| //options { | ||
| // throttle(['global_matrix_build']) | ||
| //} | ||
| axes { | ||
| axis { | ||
| name 'system' | ||
| values 'gfs', 'gefs' | ||
| } | ||
| } | ||
| stages { | ||
| stage('build system') { | ||
| steps { | ||
| script { | ||
| def HOMEgfs = "${HOME}/${system}" // local HOMEgfs is used to build the system on per system basis under the common workspace HOME | ||
| sh(script: "mkdir -p ${HOMEgfs}") | ||
| ws(HOMEgfs) { | ||
| env.MACHINE_ID = machine // MACHINE_ID is used in the build scripts to determine the machine and is added to the shell environment | ||
| if (fileExists("${HOMEgfs}/sorc/BUILT_semaphor")) { // if the system is already built, skip the build in the case of re-runs | ||
| sh(script: "cat ${HOMEgfs}/sorc/BUILT_semaphor", returnStdout: true).trim() // TODO: and user configurable control to manage build semphore | ||
| pullRequest.comment("Cloned PR already built (or build skipped) on ${machine} in directory ${HOMEgfs}<br>Still doing a checkout to get the latest changes") | ||
| sh(script: 'source workflow/gw_setup.sh; git pull --recurse-submodules') | ||
| dir('sorc') { | ||
| sh(script: './link_workflow.sh') | ||
| } | ||
| } else { | ||
| checkout scm | ||
| sh(script: 'source workflow/gw_setup.sh;which git;git --version;git submodule update --init --recursive') | ||
| def builds_file = readYaml file: 'ci/cases/yamls/build.yaml' | ||
| def build_args_list = builds_file['builds'] | ||
| def build_args = build_args_list[system].join(' ').trim().replaceAll('null', '') | ||
| dir("${HOMEgfs}/sorc") { | ||
| sh(script: "${build_args}") | ||
| sh(script: './link_workflow.sh') | ||
| sh(script: "echo ${HOMEgfs} > BUILT_semaphor") | ||
| } | ||
| } | ||
| if (env.CHANGE_ID && system == 'gfs') { | ||
| if (pullRequest.labels.any { value -> value.matches("CI-${Machine}-Building") }) { | ||
| pullRequest.removeLabel("CI-${Machine}-Building") | ||
| } | ||
| pullRequest.addLabel("CI-${Machine}-Running") | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
|
|
||
| stage('Run Tests') { | ||
| matrix { | ||
| agent { label "${machine}-emc" } | ||
| axes { | ||
| axis { | ||
| name 'Case' | ||
| // TODO add dynamic list of cases from env vars (needs addtional plugins) | ||
| values 'C48_ATM', 'C48_S2SWA_gefs', 'C48_S2SW', 'C96_atm3DVar', 'C96C48_hybatmDA', 'C96_atmsnowDA' // 'C48mx500_3DVarAOWCDA' | ||
| } | ||
| } | ||
| stages { | ||
| stage('Create Experiment') { | ||
| steps { | ||
| script { | ||
| sh(script: "sed -n '/{.*}/!p' ${HOME}/gfs/ci/cases/pr/${Case}.yaml > ${HOME}/gfs/ci/cases/pr/${Case}.yaml.tmp") | ||
| def yaml_case = readYaml file: "${HOME}/gfs/ci/cases/pr/${Case}.yaml.tmp" | ||
| system = yaml_case.experiment.system | ||
| def HOMEgfs = "${HOME}/${system}" // local HOMEgfs is used to populate the XML on per system basis | ||
| env.RUNTESTS = "${HOME}/RUNTESTS" | ||
| sh(script: "${HOMEgfs}/ci/scripts/utils/ci_utils_wrapper.sh create_experiment ${HOMEgfs}/ci/cases/pr/${Case}.yaml") | ||
| } | ||
| } | ||
| } | ||
| stage('Run Experiments') { | ||
| steps { | ||
| script { | ||
| HOMEgfs = "${HOME}/gfs" // common HOMEgfs is used to launch the scripts that run the experiments | ||
| ws(HOMEgfs) { | ||
| pslot = sh(script: "${HOMEgfs}/ci/scripts/utils/ci_utils_wrapper.sh get_pslot ${HOME}/RUNTESTS ${Case}", returnStdout: true).trim() | ||
| // pullRequest.comment("**Running** experiment: ${Case} on ${Machine}<br>With the experiment in directory:<br>`${HOME}/RUNTESTS/${pslot}`") | ||
| err = sh(script: "${HOMEgfs}/ci/scripts/run-check_ci.sh ${HOME} ${pslot}") | ||
| if (err != 0) { | ||
| pullRequest.comment("**FAILURE** running experiment: ${Case} on ${Machine}") | ||
| sh(script: "${HOMEgfs}/ci/scripts/utils/ci_utils_wrapper.sh cancel_all_batch_jobs ${HOME}/RUNTESTS") | ||
| ws(HOME) { | ||
| if (fileExists('RUNTESTS/error.logs')) { | ||
| def fileContent = readFile 'RUNTESTS/error.logs' | ||
| def lines = fileContent.readLines() | ||
| for (line in lines) { | ||
| echo "archiving: ${line}" | ||
| archiveArtifacts artifacts: "${line}", fingerprint: true | ||
| } | ||
| } | ||
| } | ||
| error("Failed to run experiments ${Case} on ${Machine}") | ||
| } | ||
| // pullRequest.comment("**SUCCESS** running experiment: ${Case} on ${Machine}") | ||
| } | ||
| } | ||
|
|
||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
|
|
||
| post { | ||
| always { | ||
| script { | ||
| if(env.CHANGE_ID) { | ||
| for (label in pullRequest.labels) { | ||
| if (label.contains("${Machine}")) { | ||
| pullRequest.removeLabel(label) | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| success { | ||
| script { | ||
| if(env.CHANGE_ID) { | ||
| pullRequest.addLabel("CI-${Machine}-Passed") | ||
| def timestamp = new Date().format('MM dd HH:mm:ss', TimeZone.getTimeZone('America/New_York')) | ||
| pullRequest.comment("**CI SUCCESS** ${Machine} at ${timestamp}\n\nBuilt and ran in directory `${HOME}`") | ||
| } | ||
| } | ||
| } | ||
| failure { | ||
| script { | ||
| if(env.CHANGE_ID) { | ||
| pullRequest.addLabel("CI-${Machine}-Failed") | ||
| def timestamp = new Date().format('MM dd HH:mm:ss', TimeZone.getTimeZone('America/New_York')) | ||
| pullRequest.comment("**CI FAILED** ${Machine} at ${timestamp}<br>Built and ran in directory `${HOME}`") | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,22 @@ | ||
| experiment: | ||
| system: gfs | ||
| mode: cycled | ||
|
|
||
| arguments: | ||
| pslot: {{ 'pslot' | getenv }} | ||
| app: ATM | ||
| resdetatmos: 48 | ||
| resensatmos: 48 | ||
| comroot: {{ 'RUNTESTS' | getenv }}/COMROOT | ||
| expdir: {{ 'RUNTESTS' | getenv }}/EXPDIR | ||
| idate: 2021032312 | ||
| edate: 2021032400 | ||
| nens: 2 | ||
| gfs_cyc: 1 | ||
| start: warm | ||
| yaml: {{ HOMEgfs }}/ci/cases/yamls/ufs_hybatmDA_defaults.ci.yaml | ||
|
|
||
| skip_ci_on_hosts: | ||
| - hera | ||
| - orion | ||
| - hercules |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,23 @@ | ||
| experiment: | ||
| system: gfs | ||
| mode: cycled | ||
|
|
||
| arguments: | ||
| pslot: {{ 'pslot' | getenv }} | ||
| app: S2S | ||
| resdetatmos: 48 | ||
| resdetocean: 5.0 | ||
| comroot: {{ 'RUNTESTS' | getenv }}/COMROOT | ||
| expdir: {{ 'RUNTESTS' | getenv }}/EXPDIR | ||
| icsdir: {{ 'ICSDIR_ROOT' | getenv }}/C48mx500 | ||
| idate: 2021032412 | ||
| edate: 2021032418 | ||
| nens: 0 | ||
| gfs_cyc: 0 | ||
| start: warm | ||
| yaml: {{ HOMEgfs }}/ci/cases/yamls/soca_gfs_defaults_ci.yaml | ||
|
|
||
| skip_ci_on_hosts: | ||
| - orion | ||
| - hera | ||
| - hercules |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,3 @@ | ||
| builds: | ||
| - gefs: './build_all.sh' | ||
| - gfs: './build_all.sh -wgu' |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,5 @@ | ||
| defaults: | ||
| !INC {{ HOMEgfs }}/parm/config/gfs/yaml/defaults.yaml | ||
| base: | ||
| ACCOUNT: {{ 'SLURM_ACCOUNT' | getenv }} | ||
| DO_JEDIOCNVAR: "YES" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,14 @@ | ||
| defaults: | ||
| !INC {{ HOMEgfs }}/parm/config/gfs/yaml/defaults.yaml | ||
| base: | ||
| DOIAU: "NO" | ||
| DO_JEDIATMVAR: "YES" | ||
| DO_JEDIATMENS: "YES" | ||
| ACCOUNT: {{ 'SLURM_ACCOUNT' | getenv }} | ||
| esfc: | ||
| DONST: "NO" | ||
| nsst: | ||
| NST_MODEL: "1" | ||
| sfcanl: | ||
| DONST: "NO" | ||
|
|
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.