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Problem reported on the R/qtl discussion group where addint() halts with an error if there's a QTL on the X chromosome and there are missing phenotypes.
Problem reported on the R/qtl discussion group where
addint()
halts with an error if there's a QTL on the X chromosome and there are missing phenotypes.I was able to reproduce the problem with the
fake.f2
dataset:It goes away if you pre-subset the cross and qtl object:
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