Update Dockerfile, added samtools and bcftools to image #54
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| name: Build | |
| on: [push, pull_request] | |
| jobs: | |
| build_wheels: | |
| name: Build wheels on ${{ matrix.os }} | |
| env: | |
| PREFIX: "/usr/local/" | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-20.04, macOS-11] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build wheels | |
| uses: pypa/cibuildwheel@v2.16.0 | |
| env: | |
| CIBW_PROJECT_REQUIRES_PYTHON: ">=3.8, <3.12" | |
| CIBW_SKIP: "*-win32 *-manylinux_i686 pp* cp311-macosx* *musl* " | |
| CIBW_ARCHS_MACOS: "x86_64 arm64" | |
| CIBW_ARCHS_LINUX: "auto" | |
| CIBW_BEFORE_ALL_MACOS: bash ci/osx-deps | |
| CIBW_BEFORE_ALL_LINUX: bash ci/manylinux-deps | |
| CIBW_BEFORE_BUILD: pip install -r requirements.txt | |
| CIBW_TEST_COMMAND: dysgu test | |
| # ... | |
| # with: | |
| # package-dir: . | |
| # output-dir: wheelhouse | |
| # config-file: "{package}/pyproject.toml" | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: ./wheelhouse/*.whl |