Last updated: February 5th, 2020
Data is associated with the following publication:
Heyduk K, et al., in review. Hybridization history and repetitive element content in the genome of a homoploid hybrid, Yucca gloriosa (Asparagaceae).
Yucca_cp_alignment.fa - Alignment of 38 Yucca chloroplast genomes and two outgroup species.
Yucca_cp_1IR_align.fa - Same as above, but with the second inverted repeat region removed. This was the alignment used to make phylogeny below.
Yucca_cp_RAxML.tre - Newick file of the resultant phylogenetic estimate, from RAxML run with 500 bootstrap replicates. Tree is bipartitions file.