LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut
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book
not-maintained
.gitignore
ABO-inbreeding.eps
GWAS-warfarin.eps
HGDP-CEPH.eps
Nilsson-Ehle.eps
README.md
Trait-scale-linear.eps
UK-Europe.eps
Untitled.bib
_config.yml
abc.tex
amova-haplotypes.eps
amova-procedure.eps
amova-sample-locations.eps
amy-tcs.eps
ancestral-polymorphism.eps
association-intro.tex
beta-distribution.eps
beta-globin.eps
cane-toad-expansion.eps
cane-toad-models.eps
coalescent-figure.eps
coalescent.eps
coalescent.tex
desmodium-structure.eps
divergence-hypotheses.eps
drift-heterozygote-advantage.eps
drift.tex
fine-structure-britain.eps
fumagalli-Bombyx.eps
fumagalli-Bombyx.psd
fumagalli-PCA.eps
gamma.eps
genetic-draft.eps
genetic-structure-assignment.tex
genetic-structure-bayes.tex
genetic-structure.tex
genetic-transmission.tex
genotypic-value.eps
globin-gene-tree.eps
globin-species-tree.eps
hardy-weinberg.tex
html.sty
human-PCA.eps
inbreeding.tex
james-assign.eps
james.eps
knowles-s-values.eps
kreitman-hudson.eps
lecture.sty
lubell-structure.eps
molevol-amova.tex
molevol-intro.tex
molevol-multigene.tex
molevol-patterns.tex
molevol-selection.tex
mutation-drift.tex
mutation.eps
nielsen-wakeley.eps
ohta-multigene.eps
outlier-high.eps
outlier.eps
popgen.bak
popgen.bib
population-genomics.tex
quant-evolution.tex
quant-intro.tex
quant-multiple.tex
quant-resemblance.tex
rdna.eps
sample-assign.eps
selection-drift.tex
selection-estimate.tex
selection-multiallele.tex
selection.tex
sky-islands.eps
statistical-phylogeography.tex
wbar.eps
wyeomyia-COI.ai
wyeomyia-COI.eps
wyeomyia-COI.psd
wyeomyia-RAD.ai
wyeomyia-RAD.eps
wyeomyia-RAD.psd

README.md

Lecture-Notes-in-Population-Genetics

The files here provide the LaTeX and other files I use for producing the lecture notes I use in EEB 5348 at the University of Connecticut: http://darwin.eeb.uconn.edu/uncommon-ground/eeb348/notes/. The LaTeX source files are licenced under a Creative Commons Attribution-ShareAlike license http://creativecommons.org/licenses/by-sa/4.0/. Some of the graphical artwork will also be available under the same license (when I have time to compile a list of all files included in the CC license). Some of the artwork is converted from published sources, and you will find citations to those sources in the notes where the artwork is used.

Files in the book subdirectory are either direct copies of those in the base directory or simple conversions to allow me to produce a single volume of notes: https://figshare.com/articles/Lecture_notes_in_population_genetics/100687. If you use or refer to these notes, please use the DOI from Figshare to cite them.

Files in the not maintained subdirectory are from pre-2017 editions of the course. I believe all of the EPS files referred to in the LaTeX source are also found in this directory, but it's possible that I've missed some. As the title of the subdirectory suggests, I'm not maintaining these notes any more. They were useful and accurate the last time I used them (so far as I know), but I make no promises for them now.