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Hello, I was trying to use Tn-seq doccker version on my dataset and I 'm stuck with the following error
Error:
Error in mutate_impl(.data, dots) :
contrasts can be applied only to factors with 2 or more levels
Calls: %>% ... mutate -> mutate_ -> mutate_.tbl_df -> mutate_impl -> .Call
Execution halted
To replicate the error here is the needed files:
TSV files created with khturner/tn-seq process_reads.py attached
gff file attached
reference genome attached
Hello, I was trying to use Tn-seq doccker version on my dataset and I 'm stuck with the following error
Error:
To replicate the error here is the needed files:
TSV files created with
khturner/tn-seq process_reads.py
attachedgff file attached
reference genome attached
download files here:
https://drive.switch.ch/index.php/s/86FDiZBJ4HNB7Hk
command used:
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