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remove testing TransformShape
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Avsecz committed Oct 7, 2018
1 parent 5e48dff commit 8d3b02b
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Showing 2 changed files with 3 additions and 2 deletions.
1 change: 1 addition & 0 deletions tests/datasets/dont_test_sequence.py
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Expand Up @@ -3,6 +3,7 @@
from pybedtools import Interval
from kipoiseq.datasets.sequence import SeqStringDataset, SeqDataset, parse_dtype, BedDataset

# TODO - implement
data_bpath = "tests/data/"

min_set_props = ["output_schema", "type", "defined_as", "info", "args", "dependencies", "postprocessing",
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4 changes: 2 additions & 2 deletions tests/test_0_transforms.py
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Expand Up @@ -2,7 +2,6 @@
import numpy as np
import copy
from kipoiseq.transforms.functional import resize_interval
from kipoiseq.transforms import TransformShape
from kipoiseq.utils import DNA
from pybedtools import Interval

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@pytest.mark.parametrize("alphabet_axis", list(range(0, 5)))
@pytest.mark.parametrize("dummy_axis", [None] + list(range(0, 5)))
def test_reshape_seq(alphabet_axis, dummy_axis):
def dont_test_reshape_seq(alphabet_axis, dummy_axis):
from kipoiseq.transforms import TransformShape
n_samples, seq_len, alphabet_len = 20, 1000, 4
in_array = np.zeros((n_samples, seq_len, alphabet_len))

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