add tabs not commas to ravens bkgd

kmayerb · Sep 2, 2020 · 469b5f1 · 469b5f1
1 parent 5b7e7a0
commit 469b5f1
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/prep/assemble_ravens.py b/prep/assemble_ravens.py
@@ -158,6 +158,6 @@ def swap(x, swaps):
 print([x for x in tsg.j_freq.keys() if x not in ref.all_genes['human'].keys()])
 assert len([x for x in tsg.j_freq.keys() if x not in ref.all_genes['human'].keys()]) == 0
 
-dfd[['v_reps','j_reps','cdr3','count','freq','subject']].to_csv("ravens_human_delta_t.sampler.tsv",index = False)
-dfg[['v_reps','j_reps','cdr3','count','freq','subject']].to_csv("ravens_human_gamma_t.sampler.tsv",index = False)
+dfd[['v_reps','j_reps','cdr3','count','freq','subject']].to_csv("ravens_human_delta_t.sampler.tsv",index = False, sep = "\t")
+dfg[['v_reps','j_reps','cdr3','count','freq','subject']].to_csv("ravens_human_gamma_t.sampler.tsv",index = False, sep = "\t")