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Kristin Muench
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Kristin Muench
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Dec 4, 2018
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,42 @@ | ||
| plas_hsk AddedGenes gene 1 1727 . + 0 gene_id "plas_hsk_before"; gene_name "plas_hsk_before"; | ||
| plas_hul AddedGenes gene 1 1726 . + 0 gene_id "plas_hul_before"; gene_name "plas_hul_before"; | ||
| plas_shp AddedGenes gene 1 1705 . + 0 gene_id "plas_shp_before"; gene_name "plas_shp_before"; | ||
| plas_hsk AddedGenes transcript 1 1727 . + 0 gene_id "plas_hsk_before"; gene_name "plas_hsk_before"; transcript_id "plas_hsk_before"; | ||
| plas_hul AddedGenes transcript 1 1727 . + 0 gene_id "plas_hul_before"; gene_name "plas_hul_before"; transcript_id "plas_hul_before"; | ||
| plas_shp AddedGenes transcript 1 1705 . + 0 gene_id "plas_shp_before"; gene_name "plas_shp_before"; transcript_id "plas_shp_before"; | ||
| plas_hsk AddedGenes exon 1 1727 . + 0 gene_id "plas_hsk_before"; gene_name "plas_hsk_before"; transcript_id "plas_hsk_before"; tss_id "plas_hsk_before"; | ||
| plas_hul AddedGenes exon 1 1726 . + 0 gene_id "plas_hul_before"; gene_name "plas_hul_before"; transcript_id "plas_hul_before"; tss_id "plas_hul_before"; | ||
| plas_shp AddedGenes exon 1 1705 . + 0 gene_id "plas_shp_before"; gene_name "plas_shp_before"; transcript_id "plas_shp_before"; tss_id "plas_shp_before"; | ||
| plas_hsk AddedGenes gene 1728 2716 . + 0 gene_id "plas_Sox2"; gene_name "plas_Sox2"; | ||
| plas_hul AddedGenes gene 1727 2717 . + 0 gene_id "plas_MYCL"; gene_name "plas_MYCL"; | ||
| plas_shp AddedGenes gene 1650 2825 . + 0 gene_id "plas_Oct4"; gene_name "plas_Oct4"; | ||
| plas_hsk AddedGenes transcript 1728 2716 . + 0 gene_id "plas_Sox2"; gene_name "plas_Sox2"; transcript_id "plas_Sox2"; | ||
| plas_hul AddedGenes transcript 1727 2717 . + 0 gene_id "plas_MYCL"; gene_name "plas_MYCL"; transcript_id "plas_MYCL"; | ||
| plas_shp AddedGenes transcript 1650 2825 . + 0 gene_id "plas_Oct4"; gene_name "plas_Oct4"; transcript_id "plas_Oct4"; | ||
| plas_hsk AddedGenes exon 1728 2716 . + 0 gene_id "plas_Sox2"; gene_name "plas_Sox2"; transcript_id "plas_Sox2"; tss_id "plas_Sox2"; | ||
| plas_hul AddedGenes exon 1727 2717 . + 0 gene_id "plas_MYCL"; gene_name "plas_MYCL"; transcript_id "plas_MYCL"; tss_id "plas_MYCL"; | ||
| plas_shp AddedGenes exon 1650 2825 . + 0 gene_id "plas_Oct4"; gene_name "plas_Oct4"; transcript_id "plas_Oct4"; tss_id "plas_Oct4"; | ||
| plas_hsk AddedGenes gene 2785 4225 . + 0 gene_id "plas_Klf4"; gene_name "plas_Klf4"; | ||
| plas_hsk AddedGenes transcript 2785 4225 . + 0 gene_id "plas_Klf4"; gene_name "plas_Klf4"; transcript_id "plas_Klf4"; | ||
| plas_hsk AddedGenes exon 2785 4225 . + 0 gene_id "plas_Klf4"; gene_name "plas_Klf4"; transcript_id "plas_Klf4"; tss_id "plas_Klf4"; | ||
| plas_hsk AddedGenes gene 4270 4860 . + 0 gene_id "plas_WPRE_hsk"; gene_name "plas_WPRE_hsk"; | ||
| plas_hsk AddedGenes transcript 4270 4860 . + 0 gene_id "plas_WPRE_hsk"; gene_name "plas_WPRE_hsk"; transcript_id "plas_WPRE_hsk"; | ||
| plas_hsk AddedGenes exon 4270 4860 . + 0 gene_id "plas_WPRE_hsk"; gene_name "plas_WPRE_hsk"; transcript_id "plas_WPRE_hsk"; tss_id "plas_WPRE_hsk"; | ||
| plas_hul AddedGenes gene 2784 3226 . + 0 gene_id "plas_Lin28"; gene_name "plas_Lin28"; | ||
| plas_hul AddedGenes transcript 2784 3226 . + 0 gene_id "plas_Lin28"; gene_name "plas_Lin28"; transcript_id "plas_Lin28"; | ||
| plas_hul AddedGenes exon 2784 3226 . + 0 gene_id "plas_Lin28"; gene_name "plas_Lin28"; transcript_id "plas_Lin28"; tss_id "plas_Lin28"; | ||
| plas_hul AddedGenes gene 3627 4218 . + 0 gene_id "plas_WPRE_hul"; gene_name "plas_WPRE_hul"; | ||
| plas_hul AddedGenes transcript 3627 4218 . + 0 gene_id "plas_WPRE_hul"; gene_name "plas_WPRE_hul"; transcript_id "plas_WPRE_hul"; | ||
| plas_hul AddedGenes exon 3627 4218 . + 0 gene_id "plas_WPRE_hul"; gene_name "plas_WPRE_hul"; transcript_id "plas_WPRE_hul"; tss_id "plas_WPRE_hul"; | ||
| plas_hul AddedGenes gene 2866 3455 . + 0 gene_id "plas_WPRE_shp"; gene_name "plas_WPRE_shp"; | ||
| plas_hul AddedGenes transcript 2866 3455 . + 0 gene_id "plas_WPRE_shp"; gene_name "plas_WPRE_shp"; transcript_id "plas_WPRE_shp"; | ||
| plas_hul AddedGenes exon 2866 3455 . + 0 gene_id "plas_WPRE_shp"; gene_name "plas_WPRE_shp"; transcript_id "plas_WPRE_shp"; tss_id "plas_WPRE_shp"; | ||
| plas_shp AddedGenes gene 3456 11886 . + 0 gene_id "plas_shp_after"; gene_name "plas_shp_after"; | ||
| plas_shp AddedGenes transcript 3456 11886 . + 0 gene_id "plas_shp_after"; gene_name "plas_shp_after"; transcript_id "plas_shp_after"; | ||
| plas_shp AddedGenes exon 3456 11886 . + 0 gene_id "plas_shp_after"; gene_name "plas_shp_after"; transcript_id "plas_shp_after"; tss_id "plas_shp_after"; | ||
| plas_hsk AddedGenes gene 4861 12915 . + 0 gene_id "plas_hsk_after"; gene_name "plas_hsk_after"; | ||
| plas_hsk AddedGenes transcript 4861 12915 . + 0 gene_id "plas_hsk_after"; gene_name "plas_hsk_after"; transcript_id "plas_hsk_after"; | ||
| plas_hsk AddedGenes exon 4861 12915 . + 0 gene_id "plas_hsk_after"; gene_name "plas_hsk_after"; transcript_id "plas_hsk_after"; tss_id "plas_hsk_after"; | ||
| plas_hul AddedGenes gene 4219 12262 . + 0 gene_id "plas_hul_after"; gene_name "plas_hul_after"; | ||
| plas_hul AddedGenes transcript 4219 12262 . + 0 gene_id "plas_hul_after"; gene_name "plas_hul_after"; transcript_id "plas_hul_after"; | ||
| plas_hul AddedGenes exon 4219 12262 . + 0 gene_id "plas_hul_after"; gene_name "plas_hul_after"; transcript_id "plas_hul_after"; tss_id "plas_hul_after"; |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| #!/bin/bash | ||
| # By Kristin Muench | ||
| # 2018.09.11 | ||
| # | ||
| # This script creates a reference index which may be necessary for aligners in order to incorporate it into a reference index. | ||
| # | ||
| # | ||
| # Documentation: | ||
| # http://www.htslib.org/doc/faidx.html | ||
| # http://www.htslib.org/doc/samtools.html | ||
| # | ||
| # # # # | ||
|
|
||
| # load samtools | ||
| module load samtools | ||
|
|
||
| # make the reference index | ||
| samtools faidx plas_shp_up.fa |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,213 @@ | ||
| >PLAS_HSK | ||
| gtcgacattgattattgactagttattaatagtaatcaattacggggtcattagttcata | ||
| gcccatatatggagttccgcgttacataacttacggtaaatggcccgcctggctgaccgc | ||
| ccaacgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgccaatag | ||
| ggactttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagtac | ||
| atcaagtgtatcatatgccaagtacgccccctattgacgtcaatgacggtaaatggcccg | ||
| cctggcattatgcccagtacatgaccttatgggactttcctacttggcagtacatctacg | ||
| tattagtcatcgctattaccatggtcgaggtgagccccacgttctgcttcactctcccca | ||
| tctcccccccctccccacccccaattttgtatttatttattttttaattattttgtgcag | ||
| cgatgggggcggggggggggggggggcgcgcgccaggcggggcggggcggggcgaggggc | ||
| ggggcgggcgaggcggagaggtgcggcggcagccaatcagagcggcgcgctccgaaagtt | ||
| tccttttatggcgaggcggcggcggcggcggccctataaaaagcgaagcgcgcggcgggc | ||
| gggagtcgctgcgcgctgccttcgccccgtgccccgctccgccgccgcctcgcgccgccc | ||
| gccccggctctgactgaccgcgttactcccacaggtgagcgggcgggacggcccttctcc | ||
| tccgggctgtaattagcgcttggtttaatgacggcttgtttcttttctgtggctgcgtga | ||
| aagccttgaggggctccgggagggccctttgtgcggggggagcggctcggggggtgcgtg | ||
| cgtgtgtgtgtgcgtggggagcgccgcgtgcggctccgcgctgcccggcggctgtgagcg | ||
| ctgcgggcgcggcgcggggctttgtgcgctccgcagtgtgcgcgaggggagcgcggccgg | ||
| gggcggtgccccgcggtgcggggggggctgcgaggggaacaaaggctgcgtgcggggtgt | ||
| gtgcgtgggggggtgagcagggggtgtgggcgcgtcggtcgggctgcaaccccccctgca | ||
| cccccctccccgagttgctgagcacggcccggcttcgggtgcggggctccgtacggggcg | ||
| tggcgcggggctcgccgtgccgggcggggggtggcggcaggtgggggtgccgggcggggc | ||
| ggggccgcctcgggccggggagggctcgggggaggggcgcggcggcccccggagcgccgg | ||
| cggctgtcgaggcgcggcgagccgcagccattgccttttatggtaatcgtgcgagagggc | ||
| gcagggacttcctttgtcccaaatctgtgcggagccgaaatctgggaggcgccgccgcac | ||
| cccctctagcgggcgcggggcgaagcggtgcggcgccggcaggaaggaaatgggcgggga | ||
| gggccttcgtgcgtcgccgcgccgccgtccccttctccctctccagcctcggggctgtcc | ||
| gcggggggacggctgccttcgggggggacggggcagggcggggttcggcttctggcgtgt | ||
| gaccggcggctctagagcctctgctaaccatgttcatgccttcttctttttcctacagct | ||
| cctgggcaacgtgctggttattgtgctgtctcatcattttggcaaagaattcgcccttca | ||
| ccatgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggg | ||
| gcggcggcggcaactccaccgcggcggcggccggcggcaaccagaaaaacagcccggacc | ||
| gcgtcaagcggcccatgaatgccttcatggtgtggtcccgcgggcagcggcgcaagatgg | ||
| cccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgagtgga | ||
| aacttttgtcggagacggagaagcggccgttcatcgacgaggctaagcggctgcgagcgc | ||
| tgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacgctca | ||
| tgaagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaatagcatgg | ||
| cgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggacagtt | ||
| acgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctgggct | ||
| acccgcagcacccgggcctcaatgcgcacggcgcagcgcagatgcagcccatgcaccgct | ||
| acgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaacggct | ||
| cgcccacctacagcatgtcctactcgcagcagggcacccctggcatggctcttggctcca | ||
| tgggttcggtggtcaagtccgaggccagctccagcccccctgtggttacctcttcctccc | ||
| actccagggcgccctgccaggccggggacctccgggacatgatcagcatgtatctccccg | ||
| gcgccgaggtgccggaacccgccgcccccagcagacttcacatgtcccagcactaccaga | ||
| gcggcccggtgcccggcacggccattaacggcacactgcccctctcacacatgggggatc | ||
| tcaaaattgtcgctcctgtcaaacaaactcttaactttgatttactcaaactggctgggg | ||
| atgtagaaagcaatccaggtccactcatgaacaattcgcccttcaccatggctgtcagtg | ||
| acgcgctgctcccatctttctccacgttcgcgtctggcccggcgggaagggagaagacac | ||
| tgcgtcaagcaggtgccccgaataaccgctggcgggaggagctctcccacatgaagcgac | ||
| ttcccccagtgcttcccggccgcccctatgacctggcggcggcgaccgtggccacagacc | ||
| tggagagcggcggagccggtgcggcttgcggcggtagcaacctggcgcccctacctcgga | ||
| gagagaccgaggagttcaacgatctcctggacctggactttattctctccaattcgctga | ||
| cccatcctccggagtcagtggccgccaccgtgtcctcgtcagcgtcagcctcctcttcgt | ||
| cgtcgccgtcgagcagcggccctgccagcgcgccctccacctgcagcttcacctatccga | ||
| tccgggccgggaacgacccgggcgtggcgccgggcggcacgggcggaggcctcctctatg | ||
| gcagggagtccgctccccctccgacggctcccttcaacctggcggacatcaacgacgtga | ||
| gcccctcgggcggcttcgtggccgagctcctgcggccagaattggacccggtgtacattc | ||
| cgccgcagcagccgcagccgccaggtggcgggctgatgggcaagttcgtgctgaaggcgt | ||
| cgctgagcgcccctggcagcgagtacggcagcccgtcggtcatcagcgtcagcaaaggca | ||
| gccctgacggcagccacccggtggtggtggcgccctacaacggcgggccgccgcgcacgt | ||
| gccccaagatcaagcaggaggcggtctcttcgtgcacccacttgggcgctggaccccctc | ||
| tcagcaatggccaccggccggctgcacacgacttccccctggggcggcagctccccagca | ||
| ggactaccccgaccctgggtcttgaggaagtgctgagcagcagggactgtcaccctgccc | ||
| tgccgcttcctcccggcttccatccccacccggggcccaattacccatccttcctgcccg | ||
| atcagatgcagccgcaagtcccgccgctccattaccaagagctcatgccacccggttcct | ||
| gcatgccagaggagcccaagccaaagaggggaagacgatcgtggccccggaaaaggaccg | ||
| ccacccacacttgtgattacgcgggctgcggcaaaacctacacaaagagttcccatctca | ||
| aggcacacctgcgaacccacacaggtgagaaaccttaccactgtgactgggacggctgtg | ||
| gatggaaattcgcccgctcagatgaactgaccaggcactaccgtaaacacacggggcacc | ||
| gcccgttccagtgccaaaaatgcgaccgagcattttccaggtcggaccacctcgccttac | ||
| acatgaagagacatttttaaaagggcgaattgcctgcaggaattcaagcttcggggacta | ||
| gtcatatgataatcaacctctggattacaaaatttgtgaaagattgactggtattcttaa | ||
| ctatgttgctccttttacgctatgtggatacgctgctttaatgcctttgtatcatgctat | ||
| tgcttcccgtatggctttcattttctcctccttgtataaatcctggttgctgtctcttta | ||
| tgaggagttgtggcccgttgtcaggcaacgtggcgtggtgtgcactgtgtttgctgacgc | ||
| aacccccactggttggggcattgccaccacctgtcagctcctttccgggactttcgcttt | ||
| ccccctccctattgccacggcggaactcatcgccgcctgccttgcccgctgctggacagg | ||
| ggctcggctgttgggcactgacaattccgtggtgttgtcggggaagctgacgtcctttcc | ||
| atggctgctcgcctgtgttgccacctggattctgcgcgggacgtccttctgctacgtccc | ||
| ttcggccctcaatccagcggaccttccttcccgcggcctgctgccggctctgcggcctct | ||
| tccgcgtcttcgccttcgccctcagacgagtcggatctccctttgggccgcctccccgca | ||
| tcggtaaattcactcctcaggtgcaggctgcctatcagaaggtggtggctggtgtggcca | ||
| atgccctggctcacaaataccactgagatctttttccctctgccaaaaattatggggaca | ||
| tcatgaagccccttgagcatctgacttctggctaataaaggaaatttattttcattgcaa | ||
| tagtgtgttggaattttttgtgtctctcactcggaaggacatatgggagggcaaatcatt | ||
| taaaacatcagaatgagtatttggtttagagtttggcaacatatgcccatatgctggctg | ||
| ccatgaacaaaggttggctataaagaggtcatcagtatatgaaacagccccctgctgtcc | ||
| attccttattccatagaaaagccttgacttgaggttagattttttttatattttgttttg | ||
| tgttatttttttctttaacatccctaaaattttccttacatgttttactagccagatttt | ||
| tcctcctctcctgactactcccagtcatagctgtccctcttctcttatggagatccctcg | ||
| acctgcagcccaagcttggcgtaatcatggtcatagctgtttcctgtgtgaaattgttat | ||
| ccgctcacaattccacacaacatacgagccggaagcataaagtgtaaagcctggggtgcc | ||
| taatgagtgagctaactcacattaattgcgttgcgctcactgcccgctttccagtcggga | ||
| aacctgtcgtgccagcggatctcaattccgatcatattcaataacccttaatataacttc | ||
| gtataatgtatgctatacgaagttattaggtctgaagaggagtttacgtccagccaagct | ||
| taggatcaattctcatgtttgacagcttatcatcgataagctgatcctcacaggccgcac | ||
| ccagcttttcttccgttgccccagtagcatctctgtctggtgaccttgaagaggaagagg | ||
| aggggtcccgagaatccccatccctaccgtccagcaaaaagggggacgaggaatttgagg | ||
| cctggcttgaggctcaggacgcaaatcttgaggatgttcagcgggagttttccgggctgc | ||
| gagtaattggtgatgaggacgaggatggttcggaggatggggaattttcagacctggatc | ||
| tgtctgacagcgaccatgaaggggatgagggtgggggggctgttggagggggcaggagtc | ||
| tgcactccctgtattcactgagcgtcgtctaataaagatgtctattgatctcttttagtg | ||
| tgaatcatgtctgacgaggggccaggtacaggacctggaaatggcctaggagagaaggga | ||
| gacacatctggaccagaaggctccggcggcagtggacctcaaagaagagggggtgataac | ||
| catggacgaggacggggaagaggacgaggacgaggaggcggaagaccaggagccccgggc | ||
| ggctcaggatcagggccaagacatagagatggtgtccggagaccccaaaaacgtccaagt | ||
| tgcattggctgcaaagggacccacggtggaacaggagcaggagcaggagcgggaggggca | ||
| ggagcaggaggggcaggagcaggaggaggggcaggagcaggaggaggggcaggaggggca | ||
| ggaggggcaggaggggcaggagcaggaggaggggcaggagcaggaggaggggcaggaggg | ||
| gcaggaggggcaggagcaggaggaggggcaggagcaggaggaggggcaggaggggcagga | ||
| gcaggaggaggggcaggaggggcaggaggggcaggagcaggaggaggggcaggagcagga | ||
| ggaggggcaggaggggcaggagcaggaggaggggcaggaggggcaggaggggcaggagca | ||
| ggaggaggggcaggagcaggaggggcaggaggggcaggaggggcaggagcaggaggggca | ||
| ggagcaggaggaggggcaggaggggcaggaggggcaggagcaggaggggcaggagcagga | ||
| ggggcaggagcaggaggggcaggagcaggaggggcaggaggggcaggagcaggaggggca | ||
| ggaggggcaggagcaggaggggcaggaggggcaggagcaggaggaggggcaggaggggca | ||
| ggagcaggaggaggggcaggaggggcaggagcaggaggggcaggaggggcaggagcagga | ||
| ggggcaggaggggcaggagcaggaggggcaggaggggcaggagcaggaggaggggcagga | ||
| gcaggaggggcaggagcaggaggtggaggccggggtcgaggaggcagtggaggccggggt | ||
| cgaggaggtagtggaggccggggtcgaggaggtagtggaggccgccggggtagaggacgt | ||
| gaaagagccagggggggaagtcgtgaaagagccagggggagaggtcgtggacgtggagaa | ||
| aagaggcccaggagtcccagtagtcagtcatcatcatccgggtctccaccgcgcaggccc | ||
| cctccaggtagaaggccatttttccaccctgtaggggaagccgattattttgaataccac | ||
| caagaaggtggcccagatggtgagcctgacgtgcccccgggagcgatagagcagggcccc | ||
| gcagatgacccaggagaaggcccaagcactggaccccggggtcagggtgatggaggcagg | ||
| cgcaaaaaaggagggtggtttggaaagcatcgtggtcaaggaggttccaacccgaaattt | ||
| gagaacattgcagaaggtttaagagctctcctggctaggagtcacgtagaaaggactacc | ||
| gacgaaggaacttgggtcgccggtgtgttcgtatatggaggtagtaagacctccctttac | ||
| aacctaaggcgaggaactgcccttgctattccacaatgtcgtcttacaccattgagtcgt | ||
| ctcccctttggaatggcccctggacccggcccacaacctggcccgctaagggagtccatt | ||
| gtctgttatttcatggtctttttacaaactcatatatttgctgaggttttgaaggatgcg | ||
| attaaggaccttgttatgacaaagcccgctcctacctgcaatatcagggtgactgtgtgc | ||
| agctttgacgatggagtagatttgcctccctggtttccacctatggtggaaggggctgcc | ||
| gcggagggtgatgacggagatgacggagatgaaggaggtgatggagatgagggtgaggaa | ||
| gggcaggagtgatgtaacttgttaggagacgccctcaatcgtattaaaagccgtgtattc | ||
| ccccgcactaaagaataaatccccagtagacatcatgcgtgctgttggtgtatttctggc | ||
| catctgtcttgtcaccattttcgtcctcccaacatggggcaattgccggaacccttaata | ||
| taacttcgtataatgtatgctatacgaagttattaggtccctcgaagaggttcactagcg | ||
| gatctcaattgggcatacccatgttgtcacgtcactcagctccgcgctcaacaccttctc | ||
| gcgttggaaaacattagcgacatttacctggtgagcaatcagacatgcgacggctttagc | ||
| ctggcctccttaaattcacctaagaatgggagcaaccagcaggaaaaggacaagcagcga | ||
| aaattcacgcccccttgggaggtggcggcatatgcaaaggatagcactcccactctacta | ||
| ctgggtatcatatgctgactgtatatgcatgaggatagcatatgctacccggatacagat | ||
| taggatagcatatactacccagatatagattaggatagcatatgctacccagatatagat | ||
| taggatagcctatgctacccagatataaattaggatagcatatactacccagatatagat | ||
| taggatagcatatgctacccagatatagattaggatagcctatgctacccagatatagat | ||
| taggatagcatatgctacccagatatagattaggatagcatatgctatccagatatttgg | ||
| gtagtatatgctacccagatataaattaggatagcatatactaccctaatctctattagg | ||
| atagcatatgctacccggatacagattaggatagcatatactacccagatatagattagg | ||
| atagcatatgctacccagatatagattaggatagcctatgctacccagatataaattagg | ||
| atagcatatactacccagatatagattaggatagcatatgctacccagatatagattagg | ||
| atagcctatgctacccagatatagattaggatagcatatgctatccagatatttgggtag | ||
| tatatgctacccatggcaacattagcccaccgtgctctcagcgacctcgtgaatatgagg | ||
| accaacaaccctgtgcttggcgctcaggcgcaagtgtgtgtaatttgtcctccagatcgc | ||
| agcaatcgcgcccctatcttggcccgcccacctacttatgcaggtattccccggggtgcc | ||
| attagtggttttgtgggcaagtggtttgaccgcagtggttagcggggttacaatcagcca | ||
| agttattacacccttattttacagtccaaaaccgcagggcggcgtgtgggggctgacgcg | ||
| tgcccccactccacaatttcaaaaaaaagagtggccacttgtctttgtttatgggcccca | ||
| ttggcgtggagccccgtttaattttcgggggtgttagagacaaccagtggagtccgctgc | ||
| tgtcggcgtccactctctttccccttgttacaaatagagtgtaacaacatggttcacctg | ||
| tcttggtccctgcctgggacacatcttaataaccccagtatcatattgcactaggattat | ||
| gtgttgcccatagccataaattcgtgtgagatggacatccagtctttacggcttgtcccc | ||
| accccatggatttctattgttaaagatattcagaatgtttcattcctacactagtattta | ||
| ttgcccaaggggtttgtgagggttatattggtgtcatagcacaatgccaccactgaaccc | ||
| cccgtccaaattttattctgggggcgtcacctgaaaccttgttttcgagcacctcacata | ||
| caccttactgttcacaactcagcagttattctattagctaaacgaaggagaatgaagaag | ||
| caggcgaagattcaggagagttcactgcccgctccttgatcttcagccactgcccttgtg | ||
| actaaaatggttcactaccctcgtggaatcctgaccccatgtaaataaaaccgtgacagc | ||
| tcatggggtgggagatatcgctgttccttaggacccttttactaaccctaattcgatagc | ||
| atatgcttcccgttgggtaacatatgctattgaattagggttagtctggatagtatatac | ||
| tactacccgggaagcatatgctacccgtttagggttaacaagggggccttataaacacta | ||
| ttgctaatgccctcttgagggtccgcttatcggtagctacacaggcccctctgattgacg | ||
| ttggtgtagcctcccgtagtcttcctgggcccctgggaggtacatgtcccccagcattgg | ||
| tgtaagagcttcagccaagagttacacataaaggcaatgttgtgttgcagtccacagact | ||
| gcaaagtctgctccaggatgaaagccactcagtgttggcaaatgtgcacatccatttata | ||
| aggatgtcaactacagtcagagaacccctttgtgtttggtccccccccgtgtcacatgtg | ||
| gaacagggcccagttggcaagttgtaccaaccaactgaagggattacatgcactgccccg | ||
| cgaagaaggggcagagatgtcgtagtcaggtttagttcgtccggggcggggcatcgatcc | ||
| tctagagtcgacgctagcggatccgctgcattaatgaatcggccaacgcgcggggagagg | ||
| cggtttgcgtattgggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgt | ||
| tcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatc | ||
| aggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaa | ||
| aaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaa | ||
| tcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttcc | ||
| ccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtc | ||
| cgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcag | ||
| ttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccga | ||
| ccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatc | ||
| gccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctac | ||
| agagttcttgaagtggtggcctaactacggctacactagaagaacagtatttggtatctg | ||
| cgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaaca | ||
| aaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaa | ||
| aggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaa | ||
| ctcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatcctttt | ||
| aaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacag | ||
| ttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccat | ||
| agttgcctgactccccgtcgtgtagataactacgatacgggagggcttaccatctggccc | ||
| cagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaa | ||
| ccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatcca | ||
| gtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaa | ||
| cgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatggcttcatt | ||
| cagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagc | ||
| ggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcact | ||
| catggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttc | ||
| tgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttg | ||
| ctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaagtgct | ||
| catcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatc | ||
| cagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccag | ||
| cgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgac | ||
| acggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcaggg | ||
| ttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggt | ||
| tccgcgcacatttccccgaaaagtgccacctgg |
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