fix: np.array error from updated numpy #39

	name: build

	on: [push]

	jobs:
	build-linux:
	runs-on: ubuntu-latest
	strategy:
	max-parallel: 5

	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.9
	uses: actions/setup-python@v2
	with:
	python-version: 3.9
	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies
	run: \|
	conda config --add channels bioconda
	conda install -c conda-forge python=3.9 minimap2 bowtie2=2.4.5 bwa samtools htslib pysam pytest cooler pytest-cov pylint codecov mappy
	pip install -Ur requirements.txt
	pip install pytest-pylint
	- name: Lint and test
	run: \|
	pytest --pylint --pylint-error-types=EF --pylint-rcfile=.pylintrc --doctest-modules --doctest-modules hicstuff
	pytest --cov=hicstuff
	codecov

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