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notes.md

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# Recurring
broken <- setdiff(broken, c("duckplyr"))
# OOM
broken <- setdiff(broken, c("msigdbr", "mtdesign", "partition", "rfars"))
# Not our problem
broken <- setdiff(broken, c("linelist"))
# Needs extension support
broken <- setdiff(broken, c("arrow"))
# https://github.com/duckdblabs/duckplyr/issues/162
broken <- setdiff(broken, c("rWCVP"))

Can't compile

  • AovBay: Needs Matrix >= 1.6.0
  • bayesdfa: OOM
  • EcoEnsemble: OOM
  • multinma: OOM

Fixed by extension

  • causalBatch: ?
  • CausalQueries: ?
  • CCWeights: Unclear
  • crosshap: Could not convert string 'A' to DOUBLE
  • dbGaPCheckup: Could not convert string 'NA' to DOUBLE
  • DescrTab2
  • fqar: Could not convert string 'hi' to DOUBLE
  • mpwR: Unclear
  • multiverse: Unclear
  • PupilPre: Could not convert string 'factor' to DOUBLE
  • sampler: ?
  • tidytransit: Could not convert string 'GS' to DOUBLE
  • vcfR: Could not convert string 'A' to DOUBLE
  • vivaldi: Could not convert string 'A' to DOUBLE
  • VWPre: Could not convert string 'factor' to DOUBLE
  • zipcodeR: Could not convert string 'NA' to DOUBLE

Done

  • comperes: Length mismatch: comparison on first 3 components
    • %in%, needed filter()
  • dtrackr: Unclear
    • summarize(.count = n(), .count = n())
  • ezplot: Unclear
    • transmute(., !!!lapply(first_expr, function(x) rlang::parse_quo(x, env = env)))
  • heemod: Unclear
    • is.na() vs. is.nan()
  • omopgenerics: Unclear
    • id integer vs. double
  • NeuroDecodeR: Unclear
    • Maximum tree depth of 200 exceeded in logical planner
  • streamDepletr: Unclear
    • Object '.' not found
  • text2sdg: Unclear
    • Object 'document' not found
  • sapfluxnetr: Unclear
    • Fixed by roundtrip check of timestamps
  • vDiveR: Unclear
    • Fixed by more careful detection of row names
  • CodelistGenerator
    • Fixed by more careful detection of row names
  • unheadr
    • Not letting grepl() through
  • ern: Unclear
    • lag() without importing it, need more data
    • Problem went away after stricter as_duckplyr_df()
  • auk: Could not convert string 'X' to INT32
  • activAnalyzer: Could not convert string '0-29' to BOOL
    • Typed NA
  • CodelistGenerator
    • union_all() on incompatible types now throws error

Needs extension support

  • arrow: min(na.rm = FALSE) and max(na.rm = FALSE)
    • Needs translation

Asked downstream

  • starschemar: Unclear
    • Weird class error
    • Only with patched duckdb not with duckplyr::methods_overwrite()

Needs special packages

  • myClim: Unimplemented type for cast (TIMESTAMP -> DOUBLE)
    • Perhaps fixed by extension?
  • TKcat: Could not convert string 'Condition' to BOOL
    • Likely fixed by duckdb update

Killed

  • msigdbr: Killed
  • mtdesign: Killed
    • Slow also for dplyr
  • partition: Killed
  • rfars: Killed

Non-fails

  • linelist
    • Test warnings that lead to an error
    • State inspector inspecting options, but harmless

Challenges

  • left_join(data.frame(ID = 1), data.frame(ID = "1", TIME = 0)) did not throw an error.

  • iNZightTools

    • join_data(iris, iris) did not throw the expected warning
    • Many-to-many warnings with joins

  • rWCVP

    • Touching columns that don't need to be touched

  • PatientProfiles

    • Flaky