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Installation fails on Amazon EKS #1488

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arun-gupta opened this issue Sep 5, 2018 · 8 comments
Closed

Installation fails on Amazon EKS #1488

arun-gupta opened this issue Sep 5, 2018 · 8 comments
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kind/question platform/eks

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@arun-gupta
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Trying to install Kubeflow on Amazon EKS as follows:

The installation fails and here is the complete log:

$ export KUBEFLOW_VERSION=0.2.5
eks $ curl https://raw.githubusercontent.com/kubeflow/kubeflow/v${KUBEFLOW_VERSION}/scripts/deploy.sh | bash
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100  1957  100  1957    0     0   6445      0 --:--:-- --:--:-- --:--:--  6458
++ pwd
+ KUBEFLOW_REPO=/Users/argu/tools/eks/kubeflow_repo
+ KUBEFLOW_VERSION=0.2.5
+ KUBEFLOW_DEPLOY=true
+ [[ ! -d /Users/argu/tools/eks/kubeflow_repo ]]
+ '[' 0.2.5 == v0.2-branch ']'
+ TAG=v0.2.5
++ mktemp -d /tmp/tmp.kubeflow-repo-XXXX
+ TMPDIR=/tmp/tmp.kubeflow-repo-BSWI
+ curl -L -o /tmp/tmp.kubeflow-repo-BSWI/kubeflow.tar.gz https://github.com/kubeflow/kubeflow/archive/v0.2.5.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100   125    0   125    0     0    370      0 --:--:-- --:--:-- --:--:--   370
100 5295k    0 5295k    0     0  2314k      0 --:--:--  0:00:02 --:--:-- 3244k
+ tar -xzvf /tmp/tmp.kubeflow-repo-BSWI/kubeflow.tar.gz -C /tmp/tmp.kubeflow-repo-BSWI
x kubeflow-0.2.5/
x kubeflow-0.2.5/.gitignore
x kubeflow-0.2.5/.pylintrc
x kubeflow-0.2.5/.style.yapf
x kubeflow-0.2.5/.travis.yml
x kubeflow-0.2.5/CONTRIBUTING.md
x kubeflow-0.2.5/LICENSE
x kubeflow-0.2.5/Makefile
x kubeflow-0.2.5/OWNERS
x kubeflow-0.2.5/README.md
x kubeflow-0.2.5/ack_guide.md
x kubeflow-0.2.5/bootstrap/
x kubeflow-0.2.5/bootstrap/.gitignore
x kubeflow-0.2.5/bootstrap/Dockerfile
x kubeflow-0.2.5/bootstrap/Dockerfile.Builder
x kubeflow-0.2.5/bootstrap/Makefile
x kubeflow-0.2.5/bootstrap/README.md
x kubeflow-0.2.5/bootstrap/app.yaml
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x kubeflow-0.2.5/bootstrap/build_image.sh
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x kubeflow-0.2.5/bootstrap/version/version.go
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x kubeflow-0.2.5/testing/workflows/environments/kubeflow-testing/main.jsonnet
x kubeflow-0.2.5/testing/workflows/environments/kubeflow-testing/params.libsonnet
x kubeflow-0.2.5/testing/workflows/environments/prow/
x kubeflow-0.2.5/testing/workflows/environments/prow/.metadata/
x kubeflow-0.2.5/testing/workflows/environments/prow/.metadata/k.libsonnet
x kubeflow-0.2.5/testing/workflows/environments/prow/.metadata/k8s.libsonnet
x kubeflow-0.2.5/testing/workflows/environments/prow/.metadata/swagger.json
x kubeflow-0.2.5/testing/workflows/environments/prow/main.jsonnet
x kubeflow-0.2.5/testing/workflows/environments/prow/params.libsonnet
x kubeflow-0.2.5/testing/workflows/lib/
x kubeflow-0.2.5/testing/workflows/lib/v1.7.0/
x kubeflow-0.2.5/testing/workflows/lib/v1.7.0/k.libsonnet
x kubeflow-0.2.5/testing/workflows/lib/v1.7.0/k8s.libsonnet
x kubeflow-0.2.5/testing/workflows/lib/v1.7.0/swagger.json
x kubeflow-0.2.5/testing/workflows/vendor/
x kubeflow-0.2.5/testing/workflows/vendor/kubeflow/
x kubeflow-0.2.5/testing/workflows/vendor/kubeflow/core/
x kubeflow-0.2.5/testing/workflows/vendor/kubeflow/core/tf-job-operator.libsonnet
x kubeflow-0.2.5/tf-controller-examples/
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/Dockerfile.cpu
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/Dockerfile.gpu
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/Dockerfile.template
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/Makefile
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/README.md
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/create_job_specs.py
x kubeflow-0.2.5/tf-controller-examples/tf-cnn/launcher.py
x kubeflow-0.2.5/user_guide.md
++ find /tmp/tmp.kubeflow-repo-BSWI -maxdepth 1 -type d -name 'kubeflow*'
+ SOURCE_DIR=/tmp/tmp.kubeflow-repo-BSWI/kubeflow-0.2.5
+ mv /tmp/tmp.kubeflow-repo-BSWI/kubeflow-0.2.5 /Users/argu/tools/eks/kubeflow_repo
+ source /Users/argu/tools/eks/kubeflow_repo/scripts/util.sh
+ check_install ks
+ which ks
+ check_install kubectl
+ which kubectl
+ DEPLOYMENT_NAME=kubeflow
++ pwd
+ KUBEFLOW_KS_DIR=/Users/argu/tools/eks/kubeflow_ks_app
++ dirname /Users/argu/tools/eks/kubeflow_ks_app
+ cd /Users/argu/tools/eks
++ basename /Users/argu/tools/eks/kubeflow_ks_app
+ ks init kubeflow_ks_app
INFO Using context "aws" from kubeconfig file "kubeconfig" 
INFO Creating environment "default" with namespace "default", pointing to "version:v1.10.3" cluster at address "https://46225C6FFDC2F87903AD594F2F0E8340.yl4.us-west-2.eks.amazonaws.com" 
INFO Generating ksonnet-lib data at path '/Users/argu/tools/eks/kubeflow_ks_app/lib/ksonnet-lib/v1.10.3' 
WARNING unable to resolve commit for refspec: master: unable to find SHA1 for URI: github.com/ksonnet/parts/tree/master/incubator: GET https://api.github.com/repos/ksonnet/parts/commits/master: 403 API rate limit exceeded for 54.240.198.33. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.) [rate reset in 4m44s]  action=GitHub.FetchRegistrySpec
WARNING falling back to cached version ()             action=GitHub.FetchRegistrySpec
+ cd /Users/argu/tools/eks/kubeflow_ks_app
+ ks registry add kubeflow /Users/argu/tools/eks/kubeflow_repo/kubeflow
+ ks pkg install kubeflow/argo
INFO Retrieved 4 files                            
+ ks pkg install kubeflow/core
INFO Retrieved 33 files                           
+ ks pkg install kubeflow/examples
INFO Retrieved 6 files                            
+ ks pkg install kubeflow/katib
INFO Retrieved 6 files                            
+ ks pkg install kubeflow/mpi-job
INFO Retrieved 5 files                            
+ ks pkg install kubeflow/pytorch-job
INFO Retrieved 5 files                            
+ ks pkg install kubeflow/seldon
INFO Retrieved 14 files                           
+ ks pkg install kubeflow/tf-serving
INFO Retrieved 5 files                            
+ ks generate kubeflow-core kubeflow-core
INFO Writing component at '/Users/argu/tools/eks/kubeflow_ks_app/components/kubeflow-core.jsonnet' 
+ ks param set kubeflow-core reportUsage true
++ uuidgen
+ ks param set kubeflow-core usageId 128015C9-175C-4E25-B415-0060340D5A17
+ true
+ ks apply default
Please enter Username: ERROR EOF
@jlewi
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jlewi commented Sep 6, 2018

Please enter Username: ERROR EOF

I've never seen that before on GKE or minikube; nor have I seen it before.

My guess is that something about EKS leads to you being prompted for a username and our script doesn't allow for entering input.

You can try to work around this by cd'ing to the directory containing your ksonnet app

/Users/argu/tools/eks/kubeflow_ks_app

And then running

ks apply default

And entering username when prompted.

You could also emit YAML manifests for all the resources e.g

ks show default > manifests.yaml

And try applying them using kubectl which is hopefully configured to correctly talk to your cluster.

@arun-gupta
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Tried:

ks apply default

What username is expected?

kubectl is configured to talk to the server.

$ kubectl get pods
No resources found.

@jlewi
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jlewi commented Sep 6, 2018

Not sure where the username is coming from. I'm guessing its an issue with ksonnet trying to connect to your Kubernetes cluster using basic auth.

ks should read your KUBECONFIG file and use that to configure how it talks to your cluster.

So it seems like an issue with ksonnet.

As a work around can you try

ks show default > /tmp/manifests.yaml
kubectl apply -f /tmp/manifests.yaml

You might also want to try deleting and recreating a new ksonnet environment

ks env rm default
ks env add newenv
ks apply newenv

@jlewi
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jlewi commented Sep 6, 2018

@Bryani any idea?

@arun-gupta since I think its a ksonnet issue you might want to try https://kubernetes.slack.com/messages/ksonnet

@arun-gupta
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Amazon EKS uses aws-iam-authenticator and an IAM role to authenticate to the k8s cluster. Do you think ksonnet might be having trouble configuring that instead?

Are there any other non-ksonnet ways to deploy kubeflow?

@arun-gupta
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@jlewi the suggested workaround:

ks show default > /tmp/manifests.yaml
kubectl apply -f /tmp/manifests.yaml

seems to work. Here is the output:

$ kubectl get pods
NAME                                        READY     STATUS    RESTARTS   AGE
ambassador-59cb5ccd89-9trgv                 2/2       Running   0          1m
ambassador-59cb5ccd89-bk94b                 1/2       Running   0          1m
ambassador-59cb5ccd89-hjvkr                 1/2       Running   0          1m
centraldashboard-7d7744cccb-n8k6d           1/1       Running   0          1m
spartakus-volunteer-57c5bf7976-9pqxs        1/1       Running   0          1m
tf-hub-0                                    1/1       Running   0          1m
tf-job-dashboard-bfc9bc6bc-tcf94            1/1       Running   0          1m
tf-job-operator-v1alpha2-756cf9cb97-d77zs   1/1       Running   0          1m

Is there anything else required after this?

@aronchick
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Nope, it's up and running! I'd definitely file the bug with ksonnet, it should work in all cases. I don't know anything about aws-iam-authenticator but communication between that, and whatever service account ksonnet is running as, would be my guess for the issue.

@arun-gupta arun-gupta mentioned this issue Sep 6, 2018
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@arun-gupta
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Will close this bug as it seems more like a ksonnet issue, following up there.

surajkota pushed a commit to surajkota/kubeflow that referenced this issue Jun 13, 2022
@Bobgy
fix: update kfp profile controller's version (kubeflow#1488)
1d717cb 
* fix: let KFP profile controller use KFP version from upstream

* update snapshots

* disable suffix hash to workaround a problem

* update snapshots

* stop using commonprefix to let configmapref work

* update snapshots
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@aronchick @arun-gupta @jlewi