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LiquidAssociation

the source code of Genome-wide trait-trait dynamics correlation study dissects the gene regulation pattern in maize kernels

liquid association

The LA theory is presented in terms of continuous random variables (Li et al, 2002, PNAS). Li proposed the concept of LA to describe how the coexpression pattern of two genes, X and Y, changes according to the level of a third gene, Z.

  • LA(X,Y|Z)=E(XYZ)

exp_qqnorm.7z

qqnormed gene expression

01_permutaion.R

Genome-wide LA significance assessment by simulation

02_genome-LA.R

genome LA

03_MLA.R

Definition of LA-scouting genes in genome-wide significant LA triplets

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