Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Trying to bring down Leiden memory use - 1 #99

Merged
merged 5 commits into from Jan 27, 2022
Merged

Trying to bring down Leiden memory use - 1 #99

merged 5 commits into from Jan 27, 2022

Conversation

AvantiShri
Copy link
Collaborator

@AvantiShri AvantiShri commented Dec 5, 2021

  • Removed some tolist() commands that might have been contributing to memory explosion
  • More detailed printouts of memory usage
  • Made it possible to specify a different number of parallel runs for the main clustering step via the n_cores_mainclustering argument to TfModiscoSeqletsToPatternsFactory

@AvantiShri AvantiShri merged commit c1cbf7c into master Jan 27, 2022
@AvantiShri AvantiShri changed the title Trying to bring down Leiden memory use Trying to bring down Leiden memory use - 1 Jan 27, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant