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Build the Docker image:
docker build --tag=bcl2fastr-dev . # in bcl2fastr top directory
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Build the docs:
docker run -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev cargo doc --document-private-items
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Develop:
docker run -it -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev
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Run tests:
docker run -it -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev cargo test
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Production (???):
docker run -it --rm --name bcl2fastr-dev bcl2fastr-dev
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bcl2fastq faster
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- Rust 85.2%
- Python 14.7%
- Dockerfile 0.1%