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Run Instructions

Build Status Code Coverage

  • Build the Docker image:

    docker build --tag=bcl2fastr-dev . # in bcl2fastr top directory

  • Build the docs:

    docker run -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev cargo doc --document-private-items

  • Develop:

    docker run -it -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev

  • Run tests:

    docker run -it -v <your local bcl2fastr path>:/usr/src/bcl2fastr --rm --name bcl2fastr-dev bcl2fastr-dev cargo test

  • Production (???):

    docker run -it --rm --name bcl2fastr-dev bcl2fastr-dev

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  • Rust 85.2%
  • Python 14.7%
  • Dockerfile 0.1%