Skip to content

Commit

Permalink
MC moved to gomi
Browse files Browse the repository at this point in the history
  • Loading branch information
kzahedi committed Jul 5, 2018
1 parent 936ebb1 commit 799c360
Show file tree
Hide file tree
Showing 14 changed files with 113 additions and 1,640 deletions.
37 changes: 11 additions & 26 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -11,54 +11,39 @@
- Conditional Entropy
- Mutual Information
- Conditional Mutual Information
- Morphological Computation Measures:
- MC_W
- MC_A
- MC_SY
- MC_WS
- MC_MI
- MC_WA
- MC_P
- Max Entropy Estimations:
- Iterative Scaling
- Information Decomposition (Bertschinger et al., 2014) for binary variables

- Morphological Computation measures have been moved to gomi
https://github.com/kzahedi/gomi

### State-dependent measures
- Mutual Information
- Conditional Mutual Information
- Entropy (Shannon)
- Morphological Computation
- MC_W
- MC_A
- MC_WS
- MC_WA
- MC_MI

- Morphological Computation measures have been moved to gomi
https://github.com/kzahedi/gomi


## Measures for continuous state spaces
### Averaged measures
- Kraskov-Stoegbauer-Grassberger, Algorithm 1
- Kraskov-Stoegbauer-Grassberger, Algorithm 2
- Frenzel-Pompe
- Morphological Computation
- MC_W
- MC_A
- MC_WS
- MC_WA
- MC_MI

- Morphological Computation measures have been moved to gomi
https://github.com/kzahedi/gomi


### State-dependent measures
- Kraskov-Stoegbauer-Grassberger, Algorithm 1
- Kraskov-Stoegbauer-Grassberger, Algorithm 2
- Frenzel-Pompe
- Morphological Computation
- MC_W
- MC_A
- MC_WS
- MC_WA
- MC_MI

- Morphological Computation measures have been moved to gomi
https://github.com/kzahedi/gomi


References:
Expand Down
4 changes: 3 additions & 1 deletion continuous/Functions.go
Original file line number Diff line number Diff line change
@@ -1,6 +1,8 @@
package continuous

import "math"
import (
"math"
)

// Distance calculates the distance between to vectors,
// given the set of indices
Expand Down
2 changes: 1 addition & 1 deletion continuous/KraskovStoegbauerGrassberger.go
Original file line number Diff line number Diff line change
Expand Up @@ -106,7 +106,7 @@ func ksgGetEpsilon(k int, xy []float64, data [][]float64, xIndices, yIndices []i

sort.Float64s(distances)

return distances[k-1] // we start to ksgCount at zero
return distances[k-1] // we start to count at zero
}

func ksgMaxNorm2(a, b []float64, xIndices, yIndices []int) float64 {
Expand Down
51 changes: 0 additions & 51 deletions continuous/MorphologicalComputation.go

This file was deleted.

225 changes: 0 additions & 225 deletions continuous/MorphologicalComputation_test.go

This file was deleted.

0 comments on commit 799c360

Please sign in to comment.