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.gitignore

.gitignore

 
 

LICENSE

LICENSE

 
 

README.md

README.md

 
 

convert_ko_to_gomfs_in_mgrast_raw_data.py

convert_ko_to_gomfs_in_mgrast_raw_data.py

 
 

ko_to_go_dict.py

ko_to_go_dict.py

 
 

kos_to_gomf_experiments_channel.py

kos_to_gomf_experiments_channel.py

 
 

map_jgi_associations_from_kos_to_gomfs.awk

map_jgi_associations_from_kos_to_gomfs.awk

 
 

map_struo_associations_from_kos_to_gomfs.awk

map_struo_associations_from_kos_to_gomfs.awk

 
 

map_uniref_to_gomf.py

map_uniref_to_gomf.py

 
 

uniref_to_gomfs_map_file.py

uniref_to_gomfs_map_file.py

 
 

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PREGO Mapping

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PREGO uses mapping scripts to map KEGG and Uniref50 ids to Gene Ontology Molecular Function ids. These mapping are facilitated using the ID mapping files from Uniprot FTP server. Scripts are written mostly with AWK because of the large size of the mapping files.

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