510 automated tests do not annotate jobs (#511)

labdao · Jul 17, 2023 · b48a5a0 · b48a5a0
1 parent ae73c3f
commit b48a5a0
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/.github/workflows/go.yml b/.github/workflows/go.yml
@@ -33,7 +33,7 @@ jobs:
 
     - name: Run Equibind
       run: |
-        result_dir=$(./plex create -t tools/equibind.json -i testdata/binding/pdbbind_processed_size1 --autoRun=true | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
+        result_dir=$(./plex create -t tools/equibind.json -i testdata/binding/pdbbind_processed_size1 --autoRun=true -a test -a ci | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
         cd "$result_dir/entry-0/outputs"
         if [ "$(find . -name '*docked.sdf' | grep 'docked.sdf')" == "" ]; then
           echo "No docked files found"

diff --git a/.github/workflows/releaser.yml b/.github/workflows/releaser.yml
@@ -59,7 +59,7 @@ jobs:
 
       - name: Run Equibind
         run: |
-          result_dir=$(./plex create -t tools/equibind.json -i testdata/binding/pdbbind_processed_size1 --autoRun=true | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
+          result_dir=$(./plex create -t tools/equibind.json -i testdata/binding/pdbbind_processed_size1 -a test -a ci --autoRun=true | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//')
           cd "$result_dir/entry-0/outputs"
           if [ "$(find . -name '*docked.sdf' | grep 'docked.sdf')" == "" ]; then
             echo "No docked files found"

diff --git a/infrastructure/ansible/files/equibind_canary.sh b/infrastructure/ansible/files/equibind_canary.sh
@@ -6,7 +6,7 @@ set -e
 # plex must run from the same place as tools directory
 cd {{ repo_dir }}
 
-plex create -t {{ repo_dir }}/tools/equibind.json -i {{ repo_dir }}/testdata/binding/pdbbind_processed_size1 --autoRun=true 2>&1 | tee plex_out.log
+plex create -t {{ repo_dir }}/tools/equibind.json -i {{ repo_dir }}/testdata/binding/pdbbind_processed_size1 -a test -a cron --autoRun=true 2>&1 | tee plex_out.log
 # capture the exit status of the plex call
 plex_result_code=${PIPESTATUS[0]}
 # exit immediately if plex exited with an error