Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[LAB-723] Update CI to use Bacalhau 1.1.2 #722

Merged
merged 12 commits into from
Oct 23, 2023
Merged

Conversation

alabdao
Copy link
Collaborator

@alabdao alabdao commented Oct 23, 2023

What type of PR is this? (check all applicable)

  • 🎮 Feature
  • 🐛 Bug Fix
  • 🍧 Refactor
  • 🔋 Optimization
  • 📓 Documentation Update

Description

Updating CI to Bacalhau 1.1.2

@linear
Copy link

linear bot commented Oct 23, 2023

@vercel
Copy link

vercel bot commented Oct 23, 2023

The latest updates on your projects. Learn more about Vercel for Git ↗︎

1 Ignored Deployment
Name Status Preview Comments Updated (UTC)
docs ⬜️ Ignored (Inspect) Visit Preview Oct 23, 2023 7:02pm

@alabdao alabdao temporarily deployed to ci October 23, 2023 13:54 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 13:54 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 13:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 13:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 13:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 14:01 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 14:01 — with GitHub Actions Inactive
…eer config option using `http`

Also removed persistence from ipfs.

Added `--max-job-execution-timeout` which is replacement for `--max-timeout`.

Also `--job-selection-probe-http` is now being used by compute node
and not requester as previously thought
@alabdao alabdao temporarily deployed to ci October 23, 2023 17:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 17:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 17:58 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:01 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:01 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:21 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:21 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:21 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:24 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:24 — with GitHub Actions Inactive
@alabdao alabdao force-pushed the ops/LAB-723-Bacalhau-1.1.2-CI branch from e16a5a6 to 4f7d469 Compare October 23, 2023 18:41
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:41 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:41 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:41 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:46 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:46 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:46 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:51 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 18:51 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 19:02 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 19:02 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 19:02 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 19:07 — with GitHub Actions Inactive
@alabdao alabdao temporarily deployed to ci October 23, 2023 19:07 — with GitHub Actions Inactive
Copy link
Contributor

@acashmoney acashmoney left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Equibind-ci hello-world works on remote linux box:

[
  {
    "outputs": {
      "best_docked_small_molecule": {
        "class": "File",
        "filepath": "7n9g_ZINC000003986735_docked.sdf",
        "ipfs": "QmVNKSej4YAW5xanNExaWF4bmeGKWgNTUpsRYgCBMsH1Sh"
      },
      "protein": {
        "class": "File",
        "filepath": "7n9g.pdb",
        "ipfs": "QmUWCBTqbRaKkPXQ3M14NkUuM4TEwfhVfrqLNoBB7syyyd"
      }
    },
    "tool": {
      "name": "equibind",
      "ipfs": "QmZCJEfs5Fmk2Aaitk8W9VXG1Nq4Bkf5nD6d4iRMJ8s36z"
    },
    "inputs": {
      "protein": {
        "class": "File",
        "filepath": "7n9g.pdb",
        "ipfs": "QmUWCBTqbRaKkPXQ3M14NkUuM4TEwfhVfrqLNoBB7syyyd"
      },
      "small_molecule": {
        "class": "File",
        "filepath": "ZINC000003986735.sdf",
        "ipfs": "QmV6qVzdQLNM6SyEDB3rJ5R5BYJsQwQTn1fjmPzvCCkCYz"
      }
    },
    "state": "completed",
    "errMsg": "",
    "userId": "",
    "bacalhauJobId": "69f8f304-8198-4620-84bf-f4d9f9ac858e"
  }
]

@alabdao alabdao merged commit c529d1d into main Oct 23, 2023
11 checks passed
@alabdao alabdao deleted the ops/LAB-723-Bacalhau-1.1.2-CI branch October 23, 2023 19:28
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants