-
Notifications
You must be signed in to change notification settings - Fork 1.7k
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
pair_comb_omp fails to compile with NVCC #43
Labels
Comments
yes, this is an issue with nvcc choking on the OpenMP atomic pragmas. |
Yeah that seems like a reasonable solution. |
nvcc from CUDA-8.0 can compile the code. |
taylor-a-barnes
added a commit
to MolSSI-MDI/lammps
that referenced
this issue
Jan 8, 2020
666e039 Update documentation b6f8a1b Merge pull request lammps#58 from MolSSI/role 237c970 Add MDI_Get_Role function aa2a534 Merge pull request lammps#57 from MolSSI/lgtm 4eda6f4 Switch to integers for version number 66bdbbc Add c_ptr_to_py_str function bd78f2c Merge pull request lammps#56 from MolSSI/coverage 9443684 Update tests d5202a8 Add testing for MDI_Init errors 8d62a73 Update tests 5404dbd Update tests f191c8f Add tests for MDI initialization dffa825 Merge pull request lammps#55 from MolSSI/units 55d9f1e Add physconst.h a96def3 Merge pull request lammps#54 from MolSSI/coverage 9513007 Update .travis.yml 15ad6da Update .travis.yml b95e0e1 Update .travis.yml 10745d0 Merge pull request lammps#53 from MolSSI/coverage 5b2e76b Update test codes e89c29f Update test codes da951f8 Update test codes 98cde24 Update test codes ebf6185 Update test codes c34ae8c Update test codes 6417d96 Update Python engine b0b1a50 Remove old mpi4py functions f672237 Update .travis.yml d6d24a7 Update .travis.yml 2391e76 Update .travis.yml 1c40013 Merge pull request lammps#52 from MolSSI/coverage cb6e245 Update Python test codes to use local build 230df9b Update test_mdi.py cace71e Update .travis.yml ea92372 Update .travis.yml 7fba0a0 Update .travis.yml 7ac54f2 Update test_mdi.py 7075fb6 Update .travis.yml 203307f Merge pull request lammps#51 from MolSSI/coverage 7dde3b9 Update .travis.yml db78c02 Update .travis.yml aae0985 Update .travis.yml 7948fba Update .travis.yml cadaa91 Update .travis.yml c03f7f0 Add codecov badge eb6e888 Merge pull request lammps#50 from MolSSI/coverage d8c4ec8 Update .travis.yml 6c00d36 Update .travis.yml e19ab56 Update .travis.yml a6fc00e Update .travis.yml bf832dc Update .travis.yml 53b441b Update .travis.yml 464caf7 Update .travis.yml 1a5edd1 Update .travis.yml 9a78fcb Update .travis.yml f4e05c9 Add code coverage token to .travis.yml 6294082 Merge pull request lammps#49 from MolSSI/test_codes dcdbeff Update exceptions in mdi.py 62b7940 Update mdi.py ac467d8 Clean mdi.py 504022e Fix bug in mdi.py 95d9130 Fix LGTM alerts 14c9289 Delete old test scripts 076a275 Update .travis.yml 655ee00 Update .travis.yml 0720394 Add test_codes cmake option fcdd571 Merge pull request lammps#48 from MolSSI/test_codes c622556 Add .travis.yml 5ddfc3c Update .travis.yml a7ea283 Update .travis.yml 097d083 Update .travis.yml 5d061dc Update .travis.yml 15ae02f Add test_mdi.py 435697a Update .travis.yml 9604c01 Update .travis.yml be4ab0d Update .travis.yml bf238a3 Update .travis.yml eb1aa88 Update cmake paths f59a995 Update Fortran MPI stubs path 8e0e11b Add MDI_Test_Codes 6ae309b Merge pull request lammps#47 from MolSSI/library 720439a Remove mdi_mpi4py.py test a80caea Remove mdi_mpi4py.py 7bdf5af Add support for communicator creation and destruction 8f4df18 Improve Python and Fortran support for the LIBRARY method d1b4a39 Merge pull request lammps#46 from MolSSI/lib_method 4e0e22f Add LIBRARY communication method 5a1eb8a Merge pull request lammps#45 from MolSSI/nodes 3b8cad4 Fix LGTM alert 1477cde Fix LGTM alerts 94bcb90 Automate communication of node information 6e1e73c Fix MPI stubs 9eec2c1 Update documentation a7db05f Merge branch 'master' of github.com:MolSSI/MDI_Library 4d22171 Expand MPI stubs 3544ab4 Merge pull request lammps#44 from MolSSI/node 526c60e Update Fortran wrapper c7c6f7a Update wrappers 8662f22 Update mdi.py 241c34f Update mdi.py 54b7218 Update mdi_general.c d748576 Update .travis.yml 01c73b4 Add functions to support the Node System 2b92632 Update MDI_Conversion_Factor arguments 78d1101 Update documentation a7b3c85 Add STRESS commands to the standard 0ec1dd7 Add nanometer and picometer conversions caa23f5 Update conversion factor names 1ec1d8e Update CMakeLists.txt 4dd4413 Merge pull request lammps#43 from MolSSI/brew 0e2e9fa Update .travis.yml 63baab3 Add QCEngine documentation f359923 Add Azure Pipelines badge aac1866 Merge pull request lammps#42 from MolSSI/openmpi b1bccc6 Add f2c MPI communicator conversions 493a26c Merge pull request lammps#41 from MolSSI/windows 482491f Correct pointer type in mdi_tcp.c 2bff48c Update .travis.yml 7b64c7b Update .travis.yml 19e23b1 Update .travis.yml afbebe7 Update .travis.yml 113a723 Update .travis.yml fb615d2 Update .travis.yml 98967ee Update .travis.yml f2fdc8f Update test scripts for Windows b97ba61 Update .travis.yml 82d4e61 Update .travis.yml 30d7921 Make cxx-cxx test Windows compatible bfd7f75 Update .travis.yml ecde6ac Update .travis.yml bfe4ae7 Update .travis.yml fdbdef4 Update .travis.yml ad28384 Merge pull request lammps#40 from MolSSI/fortran_windows 158b05b Check for Windows test executables in travis build 7e665c8 Build Fortran tests on Windows c2e266d Use MDI_WINDOWS definition in Fortran wrapper 41ced04 Merge pull request lammps#39 from MolSSI/test_scripts e998b7e Add test scripts to .travis.yml d85b3cc Add test scripts 1ed0bff Add cxx-cxx_tcp.sh 8523bbf Add MDI_WINDOWS definition ec2dec5 Improve Fortran DLL export 230a431 Fix bug in Fortran install fe677e0 Add ecosystem documentation section 32cafbf Update mdiConfig.cmake.in d155a16 Fix bug in CMake export 8b83737 Remove extra argument to EXPORT 21166d3 Update export target name f9372e7 Add CMake find_package support 503aaac Update tutorial documentation a0e5e17 Update Driver Development tutorial 99f8677 Update documentation of MDI commands Resolves lammps#24 860fe91 Document -out command-line option Resolves lammps#30. 853c1f0 Fix bug when -Dlanguage=Python git-subtree-dir: lib/mdi git-subtree-split: 666e039bcb95fc8baff307eaa3c90651a460ab99
akohlmey
pushed a commit
that referenced
this issue
Jan 22, 2020
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Using nvcc this pair style looks like it is failing to compile. I am 99% convinced this is an issue of NVCC not of the code though. For now I'd like to document it here. I will also file a bug report with NVIDIA. That said we could potentially use a workaround for the use case where this hurts (i.e. Kokkos and OMP are enabled, and Kokkos is compiled for the Cuda+OpenMP). That workaround would be to replace the OpenMP atomic with a Kokkos atomic (which has a simple pointer interface, and doesn't rely on Kokkos being initialized or anything else) if KOKKOS_HAVE_CUDA is defined. Not sure if that is acceptable. The only other thing I can do right now is to remove that pair style from the compilation.
The text was updated successfully, but these errors were encountered: