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Bathe BioNanoLab

8 followers
Cambridge, MA USA
http://bathebionano.org

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pyDAEDALUS pyDAEDALUS Public

This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami

Python 15 9
PERDIX PERDIX Public

Forked from hmjeon/PERDIX

Designer scaffolded DNA DX-based wireframe lattices

Fortran 12 2
athena athena Public

A GUI for automated sequence design of wireframe scaffolded DNA origami

Python 11 11
Off-Lattice-CanDo Off-Lattice-CanDo Public

Off-lattice finite element solver for DNA nanostructures.

MATLAB 5 4
TALOS TALOS Public

Forked from hmjeon/TALOS

Designer scaffolded DNA 6HB-based wireframe nanoparticles

Fortran 5 1
HMM-Bayes HMM-Bayes Public

MATLAB 5

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Showing 10 of 18 repositories

pyDAEDALUS Public
This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami

lcbb/pyDAEDALUS’s past year of commit activity

Python 15 9 0 0 Updated Feb 23, 2024
PRISM-CellProfiler-Analysis-Pipelines Public
PRISM CellProfiler Analysis Pipelines

lcbb/PRISM-CellProfiler-Analysis-Pipelines’s past year of commit activity

0 0 0 0 Updated Mar 20, 2023
rouls Public Forked from matthewfallan/rouls
Rouskin Lab Tools for analyzing DMS-MaPseq data

lcbb/rouls’s past year of commit activity

HTML 0 2 0 0 Updated Apr 12, 2022
ariadne Public Forked from matthewfallan/ariadne
Analyze outputs from pyDAEDALUS.

lcbb/ariadne’s past year of commit activity

Python 0 1 0 0 Updated Mar 13, 2022
3dRnaScaffoldedWireframeOrigami Public Forked from matthewfallan/3dRnaScaffoldedWireframeOrigami
Jupyter notebook for analyzing DMS-MaPseq data from DREEM, applied to 3D RNA-scaffolded wireframe origami.

lcbb/3dRnaScaffoldedWireframeOrigami’s past year of commit activity

PostScript 0 1 0 0 Updated Feb 3, 2022
athena Public
A GUI for automated sequence design of wireframe scaffolded DNA origami

lcbb/athena’s past year of commit activity

Python 11 11 9 0 Updated Nov 3, 2021
DNA-Memory-Blocks Public

lcbb/DNA-Memory-Blocks’s past year of commit activity

MATLAB 4 GPL-3.0 1 0 0 Updated Mar 5, 2021
HMM-Bayes Public

lcbb/HMM-Bayes’s past year of commit activity

MATLAB 5 0 1 0 Updated Feb 4, 2021
MSD-Bayes Public

lcbb/MSD-Bayes’s past year of commit activity

MATLAB 2 0 0 0 Updated Feb 4, 2021
METIS Public Forked from hmjeon/METIS
Mechanically Enhanced and Three-layered orIgami Structure

lcbb/METIS’s past year of commit activity

Fortran 2 GPL-3.0 4 0 0 Updated Sep 28, 2019

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