separate pypi and conda-forge tests

.github/workflows/run-unit-tests.yml → .github/workflows/run-unit-tests_conda-forge.yml

@@ -1,6 +1,6 @@
 # This workflow will install Python dependencies, run tests and lint with a variety of Python versions
 
-name: Tests
+name: Tests (conda-forge)
 
 on:
   push:

.github/workflows/run-unit-tests_pypi.yml

@@ -0,0 +1,47 @@
+# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+
+name: Tests (PyPI)
+
+on:
+  push:
+    branches: [main, feature_pytest_click]
+  pull_request:
+    branches: [main]
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ['3.9', '3.10', '3.11']
+        os: [ macos-latest, ubuntu-latest, windows-2019 ]
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v4
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        python -m pip install flake8 pytest pytest-cov
+        python -m pip install rasterio "opencv-python-headless<4.8" numpy click tqdm pyyaml
+        python -m pip list
+    - name: Lint with flake8
+      run: |
+        # stop the build if there are Python syntax errors or undefined names
+        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+    - name: Test with pytest
+      timeout-minutes: 5
+      run: |
+        python -m pytest --cov=simple_ortho --cov-report=term-missing --cov-report=xml:coverage.xml ./tests
+    - name: Upload coverage
+      uses: codecov/codecov-action@v3
+      with:
+        fail_ci_if_error: true
+        files: ./coverage.xml
+        token: ${{ secrets.CODECOV_TOKEN }}