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Feature pytest click #13

Merged
merged 236 commits into from
Oct 15, 2023
Merged

Feature pytest click #13

merged 236 commits into from
Oct 15, 2023

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dugalh
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@dugalh dugalh commented Oct 15, 2023

  • Add a nested click CLI that provides access to most of the current functionality.
  • Add pytest unit tests for all modules, and remove old unit tests.
  • Remove pandas and shapely dependencies.
  • write_mask=None writes a mask with jpeg compression.
  • Replace custom with tqdm progress bar.
  • Add io module for reading / writing / converting interior & exterior parameter files.
  • Allow camera models to have a specified cx, cy principal point.
  • Add alpha camera parameter for specifying portion of valid pixels in undistorted image.
  • Fix OpenCV nan remap issue.
  • Setup environment for auto download of PROJ transformation grids.
  • Other fixes and improvements.

dugalh added 30 commits July 17, 2023 20:59
@dugalh
remove pandas dependency
0d88821
@dugalh
remove shapely dependency
07f8e9b
@dugalh
rename x* -> xyz*
024a8d5
@dugalh
add distort option to pixel_to_world_z
28ee9a6
@dugalh
initial pytest camera module tests
5df44f0
@dugalh
remove fisheye from zero coeff test
8d8a422
@dugalh
coordinate checking additions
8443a50
@dugalh
fix pixel_to_world_z z dimensions check
362a154
@dugalh
add tests for projection dimensionality and intrinsics
dd121c8
@dugalh
fix sensor_size check
23203d7
@dugalh
tidy coordinate packing/unpacking around opencv calls
4550610
@dugalh
all coordinate projections in float64
57cde08
@dugalh
add function to distort an image with a given camera model
cfe9930
@dugalh
create distortion coefficient fixtures
8f2983d
@dugalh
relax coord comparison tolerance & add undistort test
f8ca9ad
@dugalh
add create_camera() test
c423da1
@dugalh
move polygon bounds clipping to _get_ortho_poly
a2537d7
@dugalh
add initial ortho module tests and fixtures
a159638
@dugalh
combine _get_ortho_poly & _poly_mask_dem into _mask_dem,
7c7a556 
intersect (not clip) ortho poly with dem bounds,
limit steps along ortho boundary ray
@dugalh
add _default_blocksize and fix dem crop
542312b
@dugalh
add method to test if FOV includes the horizon
1efd373
@dugalh
fix _mask_dem crop shape & check camera FOV and DEM height,
9c7bf6e
@dugalh
fix dem min & max checking/limiting
908139c
@dugalh
various fixture adjustments & simplifications
02598a7
@dugalh
updates for dict *camera_args
24c44c4
@dugalh
add _mask_dem() and and vertical datum tests
18424e5
@dugalh
add tests for process() & __init__(dem_band=...)
a01c7f2
@dugalh
change dem fixtures to 2 bands
defb049
@dugalh
fix _reproject_dem to return a copy if dem in ortho CRS and resolution
3f81dc1
@dugalh
remove redundant fixtures & simplify
ddd6304
@dugalh
fix legacy logging
b59b7c5
@dugalh
update legacy config + comments
18ac83e
@dugalh
improve test coverage
5d01536
@dugalh
stop tracemalloc when done
f9c3873
@dugalh
add verbosity test + fix tracemalloc handling
bef9031
@dugalh
add exif_image_file and xmp_no_dewarp_image_file fixtures
6629e5a
@dugalh
test exif param values
cef0766
@dugalh
move io image creation to conftest.py
a8dc00c
@dugalh
fix opk degrees in odm_xyz_opk.csv
3d47848
@dugalh
test no focal_len exif fixture & csv reader vals
d243b2a
@dugalh
add fixture and tests for multiple camera configurations
faf4280
@dugalh
reorder fixtures
79b3f77
@dugalh
replace if with @pytest.mark.skipif
cc31353
@dugalh
test exif lla_crs and no tag error
502e23b
@dugalh
replace if with @pytest.mark.skipif and test csv & exif reader lla_crs
7d4f5c5
@dugalh
hardlink not available in py3.9 - replace with copy
d78d68d
@dugalh
add fixture and test for csv angles in radians
c8bdef1
@dugalh
add dem_interp test + remove completed to dos
cff1d69
@dugalh
remove completed to dos & unused fixtures
c000e23
@dugalh
remove completed to dos
b953aa5
@dugalh
update to reflect recent changes
9512df7
@dugalh
add cx, cy
87baa0b
@dugalh
clean dependency install
46d2f3d
@dugalh
clean dependency install
6be27f5
@dugalh
fix common mask & boundless read
f6061c8
@dugalh
minor doc updates
7632d95
@dugalh
minor doc updates
90aaf4f
@dugalh
minor doc updates
d8be389
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@dugalh dugalh merged commit 4420793 into main Oct 15, 2023
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