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description_Genus.yml
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description_Genus.yml
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---
taxid: 3817
genus: Arachis
commonName: Peanut
description: "The genus Arachis contains approximately 69 species, distributed in South America east of the Andes, in the regions or Argentina, Bolivia, and Brazil. Krapovickas, A. & W.C. Gregory. 2006. Taxonomy of the genus Arachis (Leguminosae). Translated by D.E. Williams & C.E. Simpson."
species:
- cardenasii
- duranensis
- hypogaea
- ipaensis
resources:
-
name: PeanutMine
URL: "https://mines.legumeinfo.org/peanutmine/begin.do"
description: "InterMine interface for accessing genetic and genomic data for several species in Arachis."
-
name: ZZBrowse
URL: "https://zzbrowse.legumeinfo.org/?tab=WhGen&datasets=Peanut%20GWAS&chr=Arahy.01&selected=100000&window=250000&datasets2=Soybean%20GWAS&chr2=Gm01&selected2=100000&window2=250000"
description: "Association viewers (QTL, GWAS)"
-
name: Gigwa
URL: "https://peanutbase.org/germplasm/gigwa"
description: "Genetic variation viewer "
-
name: GCViT
URL: "https://peanutbase.org/germplasm/gcvit"
description: "Genetic variation viewer "
-
name: Genome Context Viewer
URL: "https://legumeinfo.org/gcv2/gene;lis=arahy.P7Z3M8?q=arahy.CMRI1Q&sources=lis&algorithm=repeat&match=10&mismatch=-1&gap=-1&score=30&threshold=25&bmatched=20&bintermediate=10&bmask=10&linkage=average&cthreshold=20&neighbors=10&matched=4&intermediate=5&bregexp=&border=chromosome®exp=&order=distance"
description: "Browser for dynamically discovering and viewing genomic synteny across selected species."
-
name: Germplasm GIS
URL: "https://legumeinfo.org/germplasm/map#?zoom=5&maxRecs=1000&taxonQuery=Arachis&traitOverlay=&traitScale=global&country=&geocodedOnly&traitExcludeUnchar=false&limitToMapExtent=false&lat=-15.71&lng=-62.62&mapHeight=430&baseMap=ESRI%20-%20NatGeo%20(default,%20reference%20map)&ne_lat=-6.446317749457646&ne_lng=-38.3203125&sw_lat=-24.56710835257599&sw_lng=-86.923828125&accessionIdsInclusive=false"
description: "Geographic information system viewer, showing collection locations for Arachis data held by the U.S. National Plant Germplasm System."