Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix declarations of centroided/smoothed setters for OnDiskMSnExp objects #593

Merged
merged 1 commit into from Jun 25, 2023
Merged

Conversation

hpages
Copy link
Contributor

@hpages hpages commented Jun 24, 2023

Salut Laurent,

With current R-devel (R 4.4), trying to install MSnbase <= 2.25.2 fails with error messages complaining about the declarations of the centroided<- and smoothed<- methods for OnDiskMSnExp objects. The complain is:

arguments ('value') after '...' in the generic must appear in the method, in the same place at the end of the argument list

We've been notified by R-core that this breaks many CRAN packages that depend directly or indirectly on MSnbase when using the latest R devel.

This commit fixes the method delcarations so that they are compatible with R >= 4.4.

Best,
H.

With current R-devel (R 4.4), trying to install MSnBase <= 2.25.2 fails
with error messages complaining about the declarations of the centroided<-
and smoothed<- methods for OnDiskMSnExp objects. The complain is:

  arguments ('value') after '...' in the generic must appear in
  the method, in the same place at the end of the argument list

This commit fixes the method delcarations so that they are compatible
with R >= 4.4.
@lgatto
Copy link
Owner

lgatto commented Jun 25, 2023

Merci beacoup! And sorry for the hassle.

@lgatto lgatto merged commit 6b48ab4 into lgatto:master Jun 25, 2023
1 of 2 checks passed
@lgatto
Copy link
Owner

lgatto commented Jun 25, 2023

I have pushed this to devel on Bioc too.

@hpages
Copy link
Contributor Author

hpages commented Jun 25, 2023

Merci Laurent !

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants