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Description of output header #9
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EC is mainly for debugging. It is also used for some functionality of bfc, but not by default. Generally, if the first integer is 0, it means the read has been corrected. In this case, the string in the format of A positive first integer indicates a failure in correction. In this case, 2 means the read has an uncorrectable "N" and 3 means too many unsuccessful attempts. |
Thanks for the explanation. |
I also see a lot of thanks. |
My last answer is inaccurate on ec:Z:e when e is non-zero. This part of code is more accurate. |
ok, .. thanks. |
Hi,
I'd like to see how/if error correction worked for my dataset.
Can you explain what e.g.
ec:Z:3
ec:Z:0_0:10_0_0:0_0
ec:Z:0_31:1_0_0:0_0
ec:Z:0_6:6_1_5:4_0
means? What about unaltered header lines?
thanks,
Sven
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