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feat: Implement DataParser class for modular SNP d
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sweep-ai[bot] committed Mar 13, 2024
1 parent b5cdfd8 commit 08c6015
Showing 1 changed file with 53 additions and 0 deletions.
53 changes: 53 additions & 0 deletions src/Snps/IO/DataParser.php
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namespace Dna\Snps\IO;

class DataParser
{
public function __construct()
{
}

public function parseFile($filePath)
{
$format = $this->detectFileFormat($filePath);
switch ($format) {
case '23andMe':
return $this->parse23andMe($filePath);
case 'AncestryDNA':
return $this->parseAncestryDNA($filePath);
case 'GSA':
return $this->parseGSA($filePath);
default:
return $this->parseGeneric($filePath);
}
}

private function detectFileFormat($filePath)
{
// Logic to detect file format based on file content or metadata
}

private function parse23andMe($filePath)
{
// Parsing logic for 23andMe files
}

private function parseAncestryDNA($filePath)
{
// Parsing logic for AncestryDNA files
}

private function parseGSA($filePath)
{
// Parsing logic for Illumina Global Screening Array files
}

private function parseGeneric($filePath)
{
// Parsing logic for generic CSV/TSV files
}

private function extractComments($filePath)
{
// Utility method to extract comments from files
}
}

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