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Sweep: #110
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🚀 Here's the PR! #116See Sweep's progress at the progress dashboard! 💎 Sweep Pro: I'm using GPT-4. You have unlimited GPT-4 tickets. (tracking ID:
4fe27ff212 )Tip I'll email you at genealogysoftwareuk@gmail.com when I complete this pull request! Actions (click)
GitHub Actions failedThe sandbox appears to be unavailable or down. Step 1: 🔎 SearchingI found the following snippets in your repository. I will now analyze these snippets and come up with a plan. Some code snippets I think are relevant in decreasing order of relevance (click to expand). If some file is missing from here, you can mention the path in the ticket description.Lines 1 to 815 in 78a634f
php-dna/src/Snps/IO/Reader.php Lines 1 to 49 in 78a634f
Lines 1 to 37 in 78a634f
Lines 1 to 85 in 78a634f
I also found the following external resources that might be helpful:Summaries of links found in the content: https://raw.githubusercontent.com/apriha/snps/master/src/snps/resources.py: The page is a Python file named "resources.py" from the "snps" project. It contains a class called "Resources" that is responsible for downloading and loading external resources. The class has various methods for retrieving reference sequences, assembly mapping data, example datasets, and other resources used in the project. The class also has methods for downloading files, managing file paths, and loading data from files. Additionally, there is a class called "ReferenceSequence" that represents and interacts with a reference sequence. The class has properties for accessing the reference sequence's ID, URL, path, assembly, species, taxonomy, sequence, MD5 hash, start position, end position, and length. The code also includes import statements, variable assignments, and a license statement. Step 2: ⌨️ CodingModify src/Snps/ReferenceSequence.php with contents:
Check src/Snps/ReferenceSequence.php with contents: Create src/Snps/Resources.php with contents:
Check src/Snps/Resources.php with contents: Step 3: 🔁 Code ReviewI have finished reviewing the code for completeness. I did not find errors for 🎉 Latest improvements to Sweep:
💡 To recreate the pull request edit the issue title or description. To tweak the pull request, leave a comment on the pull request.Something wrong? Let us know. This is an automated message generated by Sweep AI. |
Details
Convert the following files from python 3 into php 8.3 and refactor:
https://raw.githubusercontent.com/apriha/snps/master/src/snps/resources.py
Update src/Snps/Resources.php
Checklist
src/Snps/ReferenceSequence.php
✓ bbf22fe Editsrc/Snps/ReferenceSequence.php
✓ Editsrc/Snps/Resources.php
✓ 4a2b316 Editsrc/Snps/Resources.php
✓ EditThe text was updated successfully, but these errors were encountered: