VistoSeg

Welcome to VistoSeg!

This repository describes steps to run Image processing on Visium histology images for Spatial transcriptomics. You can see the documentation at http://research.libd.org/VistoSeg.

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JHPCE location: /dcs04/lieber/lcolladotor/spatialDLPFC_LIBD4035/VisiumLIBD

Name		Name	Last commit message	Last commit date
Latest commit History 171 Commits
.github/workflows		.github/workflows
code		code
images		images
pipeline_outputs		pipeline_outputs
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
Step1.Rmd		Step1.Rmd
Step2.Rmd		Step2.Rmd
Step3.Rmd		Step3.Rmd
Step4.Rmd		Step4.Rmd
Step5.Rmd		Step5.Rmd
VistoSeg.Rproj		VistoSeg.Rproj
XX-Rinfo.Rmd		XX-Rinfo.Rmd
icon_192.png		icon_192.png
icon_32.png		icon_32.png
index.Rmd		index.Rmd

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LieberInstitute/VistoSeg

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VistoSeg

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