Data
MRI data: https://openneuro.org/datasets/ds000221/versions/1.0.0
Questionnaire data: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/VMJ6NV
Preprocessing
SPM12 software: https://www.fil.ion.ucl.ac.uk/spm/software/spm12
Preprocessing and time series extraction pipeline: https://github.com/halmgren/Pipeline_effect_GSR_effective_connectivity_rsfMRI
Brain parcellation: https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/brain_parcellation/Schaefer2018_LocalGlobal/Parcellations/MNI
Toolboxes/Code
HMM-MAR toolbox: https://github.com/OHBA-analysis/HMM-MAR
PermCCA: https://github.com/andersonwinkler/PermCCA
BrewerMap: https://github.com/DrosteEffect/BrewerMap