Merge pull request #57 from klarman-cell-observatory/boli

Fixed a critical bug prevent indexing using position arrays
lilab-bcb · Feb 7, 2021 · c404980 · c404980
2 parents b93339c + 8f7a149
commit c404980
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/pegasusio/views.py b/pegasusio/views.py
@@ -151,6 +151,7 @@ def _parse_one_index(base_idx: pd.Index, index_1d: Union[INDEX1D, None], index_n
                     raise ValueError(f"Detect values exceeding the largest valid position {base_idx.size - 1} in {index_name} index!")
                 if np.unique(index_1d).size < index_1d.size:
                     raise ValueError(f"{index_name} index values are not unique!")
+                indexer = index_1d
         else:
             if not isinstance(index_1d, pd.Index):
                 assert isinstance(index_1d, np.ndarray) and index_1d.ndim == 1