Also allow copy from View of AnnData

lilab-bcb · Oct 8, 2021 · c9374e8 · c9374e8
1 parent b6fde33
commit c9374e8
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/pegasusio/unimodal_data.py b/pegasusio/unimodal_data.py
@@ -402,6 +402,9 @@ def from_anndata(self, data: anndata.AnnData, genome: str = None, modality: str
         """ Initialize from an anndata object, try best not to copy
             If genome/modality is not None, set 'genome'/'modality' as genome/modality
         """
+        if data.is_view:
+            data = data.copy()
+
         self.barcode_metadata = data.obs
         self.barcode_metadata.index.name = "barcodekey"