Enable manual dispatch of GH action #24
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| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
| workflow_dispatch | ||
| name: R-CMD-check | ||
| jobs: | ||
| R-CMD-check: | ||
| runs-on: ${{ matrix.config.os }} | ||
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| config: | ||
| - {os: macos-latest, r: 'release'} | ||
| - {os: windows-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
| - {os: ubuntu-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'oldrel-1'} | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| R_KEEP_PKG_SOURCE: yes | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: r-lib/actions/setup-pandoc@v2 | ||
| # JAGS install from https://github.com/boydorr/SpARKjags/blob/master/.github/workflows/test-build.yaml | ||
| # JAGS is automatically installed on linux via the rjags package. | ||
| - name: Install JAGS (if Windows) | ||
| if: runner.os == 'Windows' | ||
| run: | | ||
| curl.exe -o wjags.exe --url https://deac-fra.dl.sourceforge.net/project/mcmc-jags/JAGS/4.x/Windows/JAGS-4.3.1.exe | ||
| wjags.exe /S | ||
| del wjags.exe | ||
| shell: cmd | ||
| - name: Install JAGS (if macOS) | ||
| if: runner.os == 'macOS' | ||
| run: brew install jags | ||
| # R | ||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::rcmdcheck, any::covr | ||
| needs: check, coverage | ||
| - uses: r-lib/actions/check-r-package@v2 | ||
| with: | ||
| upload-snapshots: true | ||
| # Run test coverage on the fastest-to-run job | ||
| - name: Test coverage | ||
| if: matrix.config.os == 'macos-latest' && matrix.config.r == 'release' | ||
| run: | | ||
| covr::codecov( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package") | ||
| ) | ||
| shell: Rscript {0} | ||
