Python scripts for generation of .egsinp and .egsphant files for BEAM/DOSXYZnrc from DICOM data.
NOTE: These scripts have only been used with a Varian 21iX beam model and are provided with no support or guarantee that they will work out of the box. Tests should be run to verify the geometry of the resulting .egsinp files with your beam model.
The tools are not currently packaged for proper python installation. The tools can be imported in a python shell in the directory they are located by
import dicomparse
import ctcreateExample templates for BEAM/DOSXYZnrc input files are provided in the /templates folder. The BEAMnrc model is only an example that resembles the basic layout of a Varian 21iX linear accelerator, and does not represent the actual specifications of a clinical linear accelerator.
The template examples show where certain variables (preceeded by !!, e.g. !!X representing the position of the X jaw) need to be placed in the template files.
Templates should be installed in a folder at EGS_HOME/templates
.egsinp files for BEAMnrc and DOSXYZnrc can be generated using the function
dicomparse.egsinpGenerate(plandir, EGS_HOME, beamind)
where plandir is the directory containing the DICOM RP file, EGS_HOME is the location of the EGS_HOME directory on the disk, and beamind is a list of beam indexes to generate files for (not providing beamind results in input files being generated for all beams).
Resulting .egsinp files are found in the plandir directory.
Testing has only been performed on wedges using Varian Enhanced Dynamic Wedges (EDWs). EDW.py is a script used for generating dynamic jaw input files using Varian Golden Segmented Treatment Tables.
.egsphant files can be generated using the function:
ctcreate.ctcreate(EGS_HOME, ctdir, structs={})
where EGS_HOME is as explained previously, ctdir is the directory containing the DICOM CT, dose (RD) and structure set (RS) files, and structs is a dictionary containing the names and corresponding physical density of any structures to override.
The function uses CT number to physical density information read from text files located in EGS_HOME/templates. Text files should be named as the serial number of the CT scanner to which the conversion table corresponds. An example is provided.