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Laura Carroll edited this page Feb 23, 2022 · 4 revisions

Welcome to the BTyper3 wiki!

BTyper3: In silico taxonomic classification of Bacillus cereus group isolates using assembled genomes

Overview

BTyper3 is a command-line tool for taxonomically classifying Bacillus cereus group genomes using a standardized nomenclature

The program, as well as the associated databases, can be downloaded from https://github.com/lmc297/BTyper3.

Post issues at https://github.com/lmc297/BTyper3/issues

Citation

Carroll, Laura M., Martin Wiedmann, Jasna Kovac. 2020. "Proposal of a Taxonomic Nomenclature for the Bacillus cereus Group Which Reconciles Genomic Definitions of Bacterial Species with Clinical and Industrial Phenotypes." mBio 11(1): e00034-20; DOI: 10.1128/mBio.00034-20.

Carroll, Laura M., Rachel A. Cheng, Jasna Kovac. 2020. "No Assembly Required: Using BTyper3 to Assess the Congruency of a Proposed Taxonomic Framework for the Bacillus cereus group with Historical Typing Methods." Frontiers in Microbiology 11: 580691; DOI: 10.3389/fmicb.2020.580691.

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