re-rendered website again

lsinks · Nov 3, 2023 · 11893a5 · 11893a5
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diff --git a/_freeze/posts/2023-05-02-portal-project/portal/execute-results/html.json b/_freeze/posts/2023-05-02-portal-project/portal/execute-results/html.json
diff --git a/docs/listings.json b/docs/listings.json
@@ -34,5 +34,13 @@
       "/posts/2023-03-21-tidytuesday-programming-languages/index.html",
       "/posts/2023-03-14-tester-post/index.html"
     ]
+  },
+  {
+    "listing": "/portfolio.html",
+    "items": [
+      "/portfolio/Femtosecond_Laser_Spectroscopy/Femtosecond_Laser_Spectroscopy.html",
+      "/portfolio/Nanomaterials_USNano/Nanomaterials_USNano.html",
+      "/portfolio/Phosphorescence_Lifetime_Imaging/Phosphorescence_Lifetime_Imaging.html"
+    ]
   }
 ]
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/OPAs.jpg b/docs/portfolio/Femtosecond_Laser_Spectroscopy/OPAs.jpg
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/Sinks_ICPP4B.pdf b/docs/portfolio/Femtosecond_Laser_Spectroscopy/Sinks_ICPP4B.pdf
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/banner.jpg b/docs/portfolio/Femtosecond_Laser_Spectroscopy/banner.jpg
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/formamide.jpg b/docs/portfolio/Femtosecond_Laser_Spectroscopy/formamide.jpg
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/meijer_model.jpg b/docs/portfolio/Femtosecond_Laser_Spectroscopy/meijer_model.jpg
diff --git a/docs/portfolio/Femtosecond_Laser_Spectroscopy/thumbnail.jpg b/docs/portfolio/Femtosecond_Laser_Spectroscopy/thumbnail.jpg
diff --git a/docs/portfolio/Nanomaterials_USNano/Picture1.jpeg b/docs/portfolio/Nanomaterials_USNano/Picture1.jpeg
diff --git a/docs/portfolio/Nanomaterials_USNano/jetting.jpg b/docs/portfolio/Nanomaterials_USNano/jetting.jpg
diff --git a/docs/portfolio/Nanomaterials_USNano/les_photo_testing.jpg b/docs/portfolio/Nanomaterials_USNano/les_photo_testing.jpg
diff --git a/docs/portfolio/Nanomaterials_USNano/nw_strip.jpeg b/docs/portfolio/Nanomaterials_USNano/nw_strip.jpeg
diff --git a/docs/portfolio/Nanomaterials_USNano/thumbnail.jpg b/docs/portfolio/Nanomaterials_USNano/thumbnail.jpg
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/3D_polymersome.png b/docs/portfolio/Phosphorescence_Lifetime_Imaging/3D_polymersome.png
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/Image001_ch00a.jpg b/docs/portfolio/Phosphorescence_Lifetime_Imaging/Image001_ch00a.jpg
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/Sinks_HHMI.pdf b/docs/portfolio/Phosphorescence_Lifetime_Imaging/Sinks_HHMI.pdf
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/Sinks_Oxygen microscopy_2009.pdf b/docs/portfolio/Phosphorescence_Lifetime_Imaging/Sinks_Oxygen microscopy_2009.pdf
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/cell.jpg b/docs/portfolio/Phosphorescence_Lifetime_Imaging/cell.jpg
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/cell_phosphorescence.jpg b/docs/portfolio/Phosphorescence_Lifetime_Imaging/cell_phosphorescence.jpg
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/one_photon_psf.jpg b/docs/portfolio/Phosphorescence_Lifetime_Imaging/one_photon_psf.jpg
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/stability.png b/docs/portfolio/Phosphorescence_Lifetime_Imaging/stability.png
diff --git a/docs/portfolio/Phosphorescence_Lifetime_Imaging/two_photon_psf.jpg b/docs/portfolio/Phosphorescence_Lifetime_Imaging/two_photon_psf.jpg
diff --git a/docs/posts-r-code.xml b/docs/posts-r-code.xml
@@ -264,23 +264,23 @@ font-style: inherit;">"href"</span>)</span>
 <dl class="code-annotation-container-grid">
 <dt data-target-cell="annotated-cell-5" data-target-annotation="1">1</dt>
 <dd>
-<span data-code-cell="annotated-cell-5" data-code-lines="1" data-code-annotation="1">Select the elements we want out of the HTML using <code>rvest::html_nodes()</code>. The XPath code specifies that I want `a’ tags that are children of the table. Store it in link_nodes.</span>
+<span data-code-lines="1" data-code-cell="annotated-cell-5" data-code-annotation="1">Select the elements we want out of the HTML using <code>rvest::html_nodes()</code>. The XPath code specifies that I want `a’ tags that are children of the table. Store it in link_nodes.</span>
 </dd>
 <dt data-target-cell="annotated-cell-5" data-target-annotation="2">2</dt>
 <dd>
-<span data-code-cell="annotated-cell-5" data-code-lines="2" data-code-annotation="2">An alternate method is to use the more standard CSS selectors, but again, we want the <code>&lt;a&gt;</code> elements that are children of the table. It is commented out here, but it produces identical results as 1.</span>
+<span data-code-lines="2" data-code-cell="annotated-cell-5" data-code-annotation="2">An alternate method is to use the more standard CSS selectors, but again, we want the <code>&lt;a&gt;</code> elements that are children of the table. It is commented out here, but it produces identical results as 1.</span>
 </dd>
 <dt data-target-cell="annotated-cell-5" data-target-annotation="3">3</dt>
 <dd>
-<span data-code-cell="annotated-cell-5" data-code-lines="4" data-code-annotation="3">The link_node contains both the URL and the text. Here, I extract the text. There are <a href="https://rvest.tidyverse.org/reference/html_text.html">two methods in the rvest package</a>: <code>html_text()</code> is faster but might include formatting information relating to whitespace. <code>html_text2()</code> is slower but produces cleaner output.</span>
+<span data-code-lines="4" data-code-cell="annotated-cell-5" data-code-annotation="3">The link_node contains both the URL and the text. Here, I extract the text. There are <a href="https://rvest.tidyverse.org/reference/html_text.html">two methods in the rvest package</a>: <code>html_text()</code> is faster but might include formatting information relating to whitespace. <code>html_text2()</code> is slower but produces cleaner output.</span>
 </dd>
 <dt data-target-cell="annotated-cell-5" data-target-annotation="4">4</dt>
 <dd>
-<span data-code-cell="annotated-cell-5" data-code-lines="5" data-code-annotation="4">Now, I store the text in a dataframe.</span>
+<span data-code-lines="5" data-code-cell="annotated-cell-5" data-code-annotation="4">Now, I store the text in a dataframe.</span>
 </dd>
 <dt data-target-cell="annotated-cell-5" data-target-annotation="5">5</dt>
 <dd>
-<span data-code-cell="annotated-cell-5" data-code-lines="10" data-code-annotation="5">Now, I loop through the text dataframe and add on the matching URL that we extract from link_nodes using <code>html_attr("href")</code>. I had mentioned that the elements could contain attributes- attributes are additional features of the element and are expressed in the code as <code>attribute = value</code>. In this case, the format is something like <code>href= "https://sarpatriots.sar.org/patriot/display/335209"</code></span>
+<span data-code-lines="10" data-code-cell="annotated-cell-5" data-code-annotation="5">Now, I loop through the text dataframe and add on the matching URL that we extract from link_nodes using <code>html_attr("href")</code>. I had mentioned that the elements could contain attributes- attributes are additional features of the element and are expressed in the code as <code>attribute = value</code>. In this case, the format is something like <code>href= "https://sarpatriots.sar.org/patriot/display/335209"</code></span>
 </dd>
 </dl>
 </div>
@@ -8046,7 +8046,7 @@ Sinks, Louise E. 2023. <span>“TidyTuesday: Exploring Refugee Flow with A
 Sankey Diagram.”</span> August 28, 2023. <a href="https://lsinks.github.io/posts/2023-08-28-TidyTuesday-Refugees/TidyTuesday34-refugees.html">https://lsinks.github.io/posts/2023-08-28-TidyTuesday-Refugees/TidyTuesday34-refugees.html</a>.
 </div></div></section></div> ]]></description>
   <category>R</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>R-code</category>
   <category>code-along</category>
   <category>data visualization</category>
@@ -11736,7 +11736,7 @@ August 15, 2023. <a href="https://lsinks.github.io/posts/2023-08-15-TidyTuesday-
   <category>R</category>
   <category>R-code</category>
   <category>code-along</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>corrplot</category>
   <guid>https://lsinks.github.io/posts/2023-08-15-TidyTuesday-Twofer/tidytuesday-twofer.html</guid>
   <pubDate>Tue, 15 Aug 2023 04:00:00 GMT</pubDate>
@@ -38374,7 +38374,7 @@ Temperature.”</span> July 11, 2023. <a href="https://lsinks.github.io/posts/20
   <category>R</category>
   <category>R-code</category>
   <category>code-along</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>tidy</category>
   <category>gganimate</category>
   <guid>https://lsinks.github.io/posts/2023-07-11-tidytuesday-temps/temperatures.html</guid>
@@ -39700,7 +39700,7 @@ Sinks, Louise E. 2023. <span>“TidyTuesday Week 27: Historical
 Markers.”</span> July 4, 2023. <a href="https://lsinks.github.io/posts/2023-07-04-historic-markers/markers.html">https://lsinks.github.io/posts/2023-07-04-historic-markers/markers.html</a>.
 </div></div></section></div> ]]></description>
   <category>R</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>R-code</category>
   <category>data visualization</category>
   <category>sf</category>
@@ -43919,7 +43919,7 @@ Sinks, Louise E. 2023. <span>“Tidy Tuesday: US Populated Places.”</span>
 June 27, 2023. <a href="https://lsinks.github.io/posts/2023-06-27-tidytuesday-US-populated-places/arlington-neighborhoods.html">https://lsinks.github.io/posts/2023-06-27-tidytuesday-US-populated-places/arlington-neighborhoods.html</a>.
 </div></div></section></div> ]]></description>
   <category>R</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>R-code</category>
   <category>data visualization</category>
   <category>openxlsx</category>
@@ -45528,7 +45528,7 @@ Sinks, Louise E. 2023. <span>“TidyTuesday Week 18: Portal
 Project.”</span> May 2, 2023. <a href="https://lsinks.github.io/posts/2023-05-02-tidytuesday-portal-project/portal.html">https://lsinks.github.io/posts/2023-05-02-tidytuesday-portal-project/portal.html</a>.
 </div></div></section></div> ]]></description>
   <category>R</category>
-  <category>TidyTuesday</category>
+  <category>tidyTuesday</category>
   <category>R-code</category>
   <category>code-along</category>
   <category>data visualization</category>