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Fix pipeline locations in documentation.
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czwa committed Jun 6, 2022
1 parent dae0c68 commit e6458f5
Showing 1 changed file with 11 additions and 11 deletions.
22 changes: 11 additions & 11 deletions doc/lsst.cp.pipe/constructing-calibrations.rst
Original file line number Diff line number Diff line change
Expand Up @@ -295,7 +295,7 @@ Constructing biases
.. code:: bash
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/Latiss/verifyBias.yaml \
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/VerifyBias.yaml \
-i u/czw/DM-28920/biasGen.$RERUN,LATISS/raw/all,LATISS/calib \
-o u/czw/DM-28920/verifyBias.$RERUN \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES)
Expand Down Expand Up @@ -338,7 +338,7 @@ Constructing defects
.. code:: bash
pipetask --long-log run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/verifyDefect.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/VerifyDefect.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.$RERUN,u/czw/DM-28920/biasGen.20210702a,LATISS/calib \
-o u/czw/DM-28920/verifyDefect.$RERUN \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES)" >& ./defectVerify.$RERUN.log
Expand All @@ -351,7 +351,7 @@ Constructing defects

.. code:: bash
pipetask --long-log run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/verifyBias.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/VerifyBias.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210702e,u/czw/DM-28920/biasGen.20210702a,LATISS/calib \
-o u/czw/DM-28920/verifyBias.$RERUN \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES)" \
Expand Down Expand Up @@ -405,7 +405,7 @@ Constructing darks
.. code:: bash
RERUN=20210707a
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/LATISS/cpDark.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpDark.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210706h,u/czw/DM-28920/biasGen.20210702a,LATISS/calib \
-o u/czw/DM-28920/darkGen
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES) \
Expand Down Expand Up @@ -520,13 +520,13 @@ Constructing flats
.. code:: bash
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/Latiss/verifyFlat.yaml \
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/VerifyFlat.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210706h,u/czw/DM-28920/flatGen.20210712a,u/czw/DM-28920/darkGen.20210707a,u/czw/DM-28920/biasGen.20210702a,LATISS/calib
-o u/czw/DM-28920/verifyFlat.20210712a \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES_RG610, $VERIFY_EXP_RG610) \
-j 4 >& ./flatVerify.20210712a.log
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/Latiss/verifyFlat.yaml \
pipetask run -b $BUTLER_REPO -p $CP_VERIFY_DIR/pipelines/VerifyFlat.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210706h,u/czw/DM-28920/flatGen.20210712b,u/czw/DM-28920/darkGen.20210707a,u/czw/DM-28920/biasGen.20210702a,LATISS/calib
-o u/czw/DM-28920/verifyFlat.20210712a \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES_empty, $VERIFY_EXP_empty) \
Expand Down Expand Up @@ -591,13 +591,13 @@ Measuring the photon transfer curve
.. code:: bash
RERUN=20210712a
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/measurePhotonTransferCurve.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpPtc.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210712a,u/czw/DM-28920/flatGen.20210712b,u/czw/DM-28920/darkGen.20210707a,u/czw/DM-28920/biasGen.20210702a,LATISS/calib \
-o u/czw/DM-28920/ptcGen.$RERUN -d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES_RG610, $EXCLUDED_RG610)" \
-c isr:doCrosstalk=False -j 4 >& ./ptc.$RERUN.log
RERUN=20210712b
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/measurePhotonTransferCurve.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpPtc.yaml \
-i LATISS/raw/all,u/czw/DM-28920/defectGen.20210712a,u/czw/DM-28920/flatGen.20210712b,u/czw/DM-28920/darkGen.20210707a,u/czw/DM-28920/biasGen.20210702a,LATISS/calib \
-o u/czw/DM-28920/ptcGen.$RERUN -d "instrument='LATISS' AND detector=0 AND exposure IN ($VERIFY_EXP_RG610)" \
-c isr:doCrosstalk=False -j 4 >& ./ptc.$RERUN.log
Expand Down Expand Up @@ -632,15 +632,15 @@ Constructing a linearity correction
.. code:: bash
RERUN=20210713a
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/cpLinearitySolve.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpLinearitySolve.yaml \
-i u/czw/DM-28920/tempPtcA,LATISS/calib,LATISS/raw/all \
-o u/czw/DM-28920/linearityGen.$RERUN \
-d "instrument='LATISS' AND exposure=$EXPOSURES_A AND detector = 0" \
-c linearitySolve:ignorePtcMask=True \
>& ./linearity.$RERUN.log
RERUN=20210713b
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/cpLinearitySolve.yaml \
pipetask --long-log run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpLinearitySolve.yaml \
-i u/czw/DM-28920/tempPtcB,LATISS/calib,LATISS/raw/all \
-o u/czw/DM-28920/linearityGen.$RERUN \
-d "instrument='LATISS' AND exposure=$EXPOSURES_B AND detector = 0" \
Expand Down Expand Up @@ -809,7 +809,7 @@ Constructing sky frames
.. code:: bash
RERUN=202107XXa
pipetask run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpSkySolve.yaml \
pipetask run -b $BUTLER_REPO -p $CP_PIPE_DIR/pipelines/Latiss/cpSky.yaml \
-i LATISS/raw/all,LATISS/calib,u/czw/DM-28920/calib \
-o u/czw/DM-28920/skyGen.$RERUN \
-d "instrument='LATISS' AND detector=0 AND exposure IN ($EXPOSURES)" \
Expand Down

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