-
Notifications
You must be signed in to change notification settings - Fork 4
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #112 from lsst/tickets/DM-39592
DM-39592: Add support for Auxtel/LATISS and add associated tests.
- Loading branch information
Showing
23 changed files
with
650 additions
and
102 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -5,6 +5,7 @@ exclude = | |
| doc/conf.py, | ||
| **/*/__init__.py, | ||
| tests/config/*, | ||
| cookbook | ||
| cookbook, | ||
| tests/TestFgcm* | ||
|
|
||
| [tool:pytest] | ||
File renamed without changes.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,37 @@ | ||
| from lsst.pipe.tasks.colorterms import Colorterm, ColortermDict | ||
|
|
||
|
|
||
| config.data = { | ||
| "atlas_refcat2*": ColortermDict(data={ | ||
| "SDSSg_65mm~empty": Colorterm( | ||
| primary="g", | ||
| secondary="r", | ||
| c0=-0.09034144345111599, | ||
| c1=0.1710923238086337, | ||
| c2=-0.038260355621929296, | ||
| ), | ||
| "SDSSr_65mm~empty": Colorterm( | ||
| primary="r", | ||
| secondary="i", | ||
| c0=0.0073632488906825045, | ||
| c1=-0.026620900037027242, | ||
| c2=-0.03203533692013322, | ||
| ), | ||
| "SDSSi_65mm~empty": Colorterm( | ||
| primary="i", | ||
| secondary="r", | ||
| c0=0.016940180565664747, | ||
| c1=0.0610018330811135, | ||
| c2=-0.0722575356707918, | ||
| ), | ||
| # The following two are blank until we have data to measure them. | ||
| "SDSSz_65mm~empty": Colorterm( | ||
| primary="z", | ||
| secondary="z", | ||
| ), | ||
| "SDSSy_65mm~empty": Colorterm( | ||
| primary="y", | ||
| secondary="y", | ||
| ), | ||
| }), | ||
| } |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,35 @@ | ||
| import os | ||
| from lsst.obs.lsst.filters import LATISS_FILTER_DEFINITIONS | ||
|
|
||
| # The filterMap and bands are for the small subset of bands used in the tests | ||
| config.physicalFilterMap = { | ||
| "SDSSg_65mm~empty": "g", | ||
| "SDSSr_65mm~empty": "r", | ||
| "SDSSi_65mm~empty": "i", | ||
| } | ||
| config.requiredBands = ["g", "r"] | ||
| config.primaryBands = ["r"] | ||
| # The coarseNside is set appropriate to the area of the test data | ||
| config.coarseNside = 64 | ||
| # The tests are done with only the brightest reference stars | ||
| config.fgcmLoadReferenceCatalog.referenceSelector.signalToNoise.minimum = 50.0 | ||
|
|
||
| config.instFluxField = "apFlux_35_0_instFlux" | ||
| config.apertureInnerInstFluxField = "apFlux_35_0_instFlux" | ||
| config.apertureOuterInstFluxField = "apFlux_50_0_instFlux" | ||
|
|
||
| config.minPerBand = 2 | ||
| config.connections.ref_cat = "atlas_refcat2_20220201" | ||
|
|
||
| configDir = os.path.join(os.path.dirname(__file__)) | ||
| config.physicalFilterMap = LATISS_FILTER_DEFINITIONS.physical_to_band | ||
| config.doSubtractLocalBackground = True | ||
| config.sourceSelector["science"].flags.bad.append("localBackground_flag") | ||
| config.sourceSelector["science"].signalToNoise.fluxField = "apFlux_35_0_instFlux" | ||
| config.sourceSelector["science"].signalToNoise.errField = "apFlux_35_0_instFluxErr" | ||
| config.fgcmLoadReferenceCatalog.load(os.path.join(configDir, "filterMapLatiss.py")) | ||
| config.fgcmLoadReferenceCatalog.applyColorTerms = True | ||
| config.fgcmLoadReferenceCatalog.colorterms.load(os.path.join(configDir, "colortermsLatiss.py")) | ||
| config.fgcmLoadReferenceCatalog.referenceSelector.doSignalToNoise = True | ||
| config.fgcmLoadReferenceCatalog.referenceSelector.signalToNoise.fluxField = "i_flux" | ||
| config.fgcmLoadReferenceCatalog.referenceSelector.signalToNoise.errField = "i_fluxErr" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,108 @@ | ||
| import lsst.fgcmcal as fgcmcal | ||
|
|
||
| config.outfileBase = "TestFgcm" | ||
| # Use these bands and fit them. | ||
| # i band does not have any observations in tests, this ensures | ||
| # that the code performs properly when there are missing bands. | ||
| config.bands = ["g", "r", "i"] | ||
| config.fitBands = ["g", "r", "i"] | ||
| from lsst.obs.lsst.filters import LATISS_FILTER_DEFINITIONS | ||
| config.physicalFilterMap = LATISS_FILTER_DEFINITIONS.physical_to_band | ||
| # Only require g, r observations for a star to be a calibration star. | ||
| config.requiredBands = ["g", "r"] | ||
| # Do 5 iterations in multi-cycle run mode. | ||
| config.maxIterBeforeFinalCycle = 5 | ||
| config.nCore = 1 | ||
| config.cycleNumber = 0 | ||
| config.utBoundary = 0.0 | ||
| config.washMjds = (0.0, ) | ||
| # For tests, define 1 observing epoch that encompasses everything. | ||
| config.epochMjds = (0.0, 100000.0) | ||
| config.coatingMjds = [] | ||
| config.latitude = -30.2333 | ||
| # This is pi*(1.2/2.)**2. | ||
| config.mirrorArea = 1.13097 | ||
| config.defaultCameraOrientation = 0.0 | ||
| config.brightObsGrayMax = 0.5 | ||
| config.expGrayInitialCut = -0.5 | ||
| config.expGrayPhotometricCutDict = {"g": -0.5, "r": -0.5, "i": -0.5} | ||
| config.expGrayHighCutDict = {"g": 0.2, "r": 0.2, "i": 0.2} | ||
| config.expVarGrayPhotometricCutDict = {"g": 0.1**2., | ||
| "r": 0.1**2., | ||
| "i": 0.1**2.} | ||
| # For tests, make a broad cut for outliers. | ||
| config.autoPhotometricCutNSig = 5.0 | ||
| config.autoHighCutNSig = 5.0 | ||
| # Fit aperture corrections with only 2 bins to exercise the code. | ||
| config.aperCorrFitNBins = 2 | ||
| config.aperCorrInputSlopeDict = {"g": -1.0, | ||
| "r": -1.0, | ||
| "i": -1.0} | ||
| # Define the band to SED constants approximately so they work | ||
| # for data that only has r, r observations. | ||
| config.sedboundaryterms = fgcmcal.SedboundarytermDict() | ||
| config.sedboundaryterms.data["gr"] = fgcmcal.Sedboundaryterm(primary="g", | ||
| secondary="r") | ||
| config.sedterms = fgcmcal.SedtermDict() | ||
| config.sedterms.data["g"] = fgcmcal.Sedterm(primaryTerm="gr", secondaryTerm=None, | ||
| extrapolated=False, constant=0.0) | ||
| config.sedterms.data["r"] = fgcmcal.Sedterm(primaryTerm="gr", secondaryTerm=None, | ||
| extrapolated=False, constant=1.0) | ||
| config.sedterms.data["i"] = fgcmcal.Sedterm(primaryTerm="gr", secondaryTerm=None, | ||
| extrapolated=False, constant=0.75) | ||
| # Define good stars with an g-r color cut. | ||
| config.starColorCuts = ("g, r, -0.50, 2.25",) | ||
| config.refStarColorCuts = ("g, r, -0.50, 2.25",) | ||
| config.useExposureReferenceOffset = True | ||
| config.precomputeSuperStarInitialCycle = False | ||
| config.superStarSubCcdDict = {"g": True, | ||
| "r": True, | ||
| "i": True} | ||
| config.superStarPlotCcdResiduals = True | ||
| # Allow calibration to work with just 1 exposure on a night. | ||
| config.minExpPerNight = 1 | ||
| # Allow calibration to work with very few stars per exposure. | ||
| config.minStarPerExp = 5 | ||
| # Allow calibration to work with small number of stars in processing batches. | ||
| config.nStarPerRun = 50 | ||
| config.nExpPerRun = 2 | ||
| # Define g-r color as the primary way to split by color. | ||
| config.colorSplitBands = ["g", "r"] | ||
| config.freezeStdAtmosphere = True | ||
| # For tests, do low-order per-ccd polynomial. | ||
| config.superStarSubCcdChebyshevOrder = 1 | ||
| config.ccdGraySubCcdDict = {"g": False, | ||
| "r": False, | ||
| "i": False} | ||
| config.ccdGrayFocalPlaneDict = {"g": False, | ||
| "r": False, | ||
| "i": False} | ||
| config.ccdGrayFocalPlaneFitMinCcd = 1 | ||
| config.ccdGrayFocalPlaneChebyshevOrder = 1 | ||
| # Do not model the magnitude errors (use errors as reported). | ||
| config.modelMagErrors = False | ||
| # Fix the sigma_cal calibration noise to 0.003 mag. | ||
| config.sigmaCalRange = (0.003, 0.003) | ||
| # Do not fit instrumental parameters (mirror decay) per band. | ||
| config.instrumentParsPerBand = False | ||
| # Set the random seed for repeatability in fits. | ||
| config.randomSeed = 12345 | ||
| # Do not use star repeatability metrics for selecting exposures. | ||
| # (Instead, use exposure repeatability metrics). | ||
| config.useRepeatabilityForExpGrayCutsDict = {"g": False, | ||
| "r": False, | ||
| "i": False} | ||
| config.sigFgcmMaxEGrayDict = {"g": 0.1, | ||
| "r": 0.1, | ||
| "i": 0.1} | ||
| config.approxThroughputDict = {"g": 1.0, | ||
| "r": 1.0, | ||
| "i": 1.0} | ||
|
|
||
| config.deltaAperFitPerCcdNx = 2 | ||
| config.deltaAperFitPerCcdNy = 2 | ||
| config.deltaAperInnerRadiusArcsec = 2.04 | ||
| config.deltaAperOuterRadiusArcsec = 2.89 | ||
| config.doComputeDeltaAperPerVisit = True | ||
| config.doComputeDeltaAperMap = True | ||
| config.doComputeDeltaAperPerCcd = True |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,2 @@ | ||
| config.physicalFilters = ['SDSSg_65mm~empty', 'SDSSr_65mm~empty', 'SDSSi_65mm~empty'] | ||
| config.atmosphereTableName = 'fgcm_atm_lsst2_test' |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.