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During database recreation, there is an issue with not finding module psycopg2. It looks like it doesn't get installed with requirements.txt, so I'm creating this issue for investigation on why.
What I Did
Traceback from main command:
$ python3 client.py recreate_db
NotifyConfig: env var NOTIFY_PWD not found.
Traceback (most recent call last):
File "/Users/lucianadacostamarques/Documents/Mestrado/hads_/client.py", line 144, in <module>
main()
File "/Users/lucianadacostamarques/Documents/Mestrado/hads_/client.py", line 136, in main
loader = Loader(args=parser.parse_args())
File "/Users/lucianadacostamarques/Documents/Mestrado/hads_/control/util/loader.py", line 121, in __init__
self.__get_execution_id()
File "/Users/lucianadacostamarques/Documents/Mestrado/hads_/control/util/loader.py", line 232, in __get_execution_id
repo = PostgresRepo()
File "/Users/lucianadacostamarques/Documents/Mestrado/hads_/control/repository/postgres_repo.py", line 32, in __init__
self.engine = create_engine(connection_string)
File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/__init__.py", line 500, in create_engine
return strategy.create(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/sqlalchemy/engine/strategies.py", line 87, in create
dbapi = dialect_cls.dbapi(**dbapi_args)
File "/usr/local/lib/python3.9/site-packages/sqlalchemy/dialects/postgresql/psycopg2.py", line 753, in dbapi
import psycopg2
ModuleNotFoundError: No module named 'psycopg2'
When trying to install with pip:
$ pip3 install psycopg2
Collecting psycopg2
Using cached psycopg2-2.9.3.tar.gz (380 kB)
ERROR: Command errored out with exit status 1:
command: /usr/local/opt/python@3.9/bin/python3.9 -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-install-wuxadyo0/psycopg2_4a3067e1d2904eb4bbc7af5b0aa6106d/setup.py'"'"'; __file__='"'"'/private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-install-wuxadyo0/psycopg2_4a3067e1d2904eb4bbc7af5b0aa6106d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0
cwd: /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-install-wuxadyo0/psycopg2_4a3067e1d2904eb4bbc7af5b0aa6106d/
Complete output (23 lines):
running egg_info
creating /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0/psycopg2.egg-info
writing /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0/psycopg2.egg-info/PKG-INFO
writing dependency_links to /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0/psycopg2.egg-info/dependency_links.txt
writing top-level names to /private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0/psycopg2.egg-info/top_level.txt
writing manifest file '/private/var/folders/hg/7rjk1bsj58n_1j_hgf96rq4h0000gn/T/pip-pip-egg-info-awhp9jq0/psycopg2.egg-info/SOURCES.txt'
Error: pg_config executable not found.
pg_config is required to build psycopg2 from source. Please add the directory
containing pg_config to the $PATH or specify the full executable path with the
option:
python setup.py build_ext --pg-config /path/to/pg_config build ...
or with the pg_config option in 'setup.cfg'.
If you prefer to avoid building psycopg2 from source, please install the PyPI
'psycopg2-binary' package instead.
For further information please check the 'doc/src/install.rst' file (also at
<https://www.psycopg.org/docs/install.html>).
----------------------------------------
WARNING: Discarding https://files.pythonhosted.org/packages/d1/1e/b450599a27b1809bccbd4e369f397cb18dc56b875778d961f9ae180b54b7/psycopg2-2.9.3.tar.gz#sha256=8e841d1bf3434da985cc5ef13e6f75c8981ced601fd70cc6bf33351b91562981 (from https://pypi.org/simple/psycopg2/) (requires-python:>=3.6). Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
[.....]
The text was updated successfully, but these errors were encountered:
We could update the psycopg2 version to the latest, which they say is compatible with macos, but wanted to confirm with you first because there's always the possibility of creating new problems when upgrading packages.
Description
During database recreation, there is an issue with not finding module psycopg2. It looks like it doesn't get installed with
requirements.txt
, so I'm creating this issue for investigation on why.What I Did
Traceback from main command:
When trying to install with pip:
The text was updated successfully, but these errors were encountered: