Trying to fix an edge case for EI-CoreBioinformatics#133

lucventurini · Oct 12, 2018 · ef388fc · ef388fc
1 parent 6175eb2
commit ef388fc
Showing 1 changed file with 5 additions and 4 deletions.
diff --git a/Mikado/parsers/bed12.py b/Mikado/parsers/bed12.py
@@ -201,10 +201,11 @@ def __init__(self, *args: Union[str, list, tuple, GffLine],
 
         if "phase=" in self.name and "coding=" in self.name:  # Hack to include the properties
             groups = dict(re.findall("([^(;|=)]*)=([^;]*)", self.name))
-            if groups["phase"].isdigit():
-                self.phase = int(groups["phase"])
-            else:
-                self.phase = None
+            if phase is not None:
+                if groups["phase"].isdigit():
+                    self.phase = int(groups["phase"])
+                else:
+                    self.phase = None
             if groups["coding"] in ("True", "False"):
                 self.coding = eval(groups["coding"])
             else: