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Merge pull request #34 from luukvdmeer/ghactions
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Add ghactions from sf
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luukvdmeer committed Apr 6, 2020
2 parents bc273b1 + 9114448 commit 0ed0902
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122 changes: 122 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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# Action script of tests conducted for all platforms. The complete suite
# of tests is described in .github/workflows/R-CMD-check-with-db.yaml

on:
push:
pull_request:
branches:
- master
- develop

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}


name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
# - {os: windows-latest, r: '3.6'}
# - {os: macOS-latest, r: '3.6', args: '--install-args=\"--configure-args=--with-proj-lib=/usr/local/lib/\"", "--ignore-vignettes', build_args: "--no-build-vignettes"}
- {os: macOS-latest, r: 'devel', args: '--install-args=\"--configure-args=--with-proj-lib=/usr/local/lib/\"", "--ignore-vignettes', build_args: "--no-build-vignettes"}
# - {os: ubuntu-16.04, r: '3.5', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
# - {os: ubuntu-16.04, r: '3.6', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- {os: ubuntu-latest, r: 'release'}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
CRAN: ${{ matrix.config.cran }}

steps:
- uses: actions/checkout@v1

- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}

- uses: r-lib/actions/setup-pandoc@master

- name: Brew and macOS config
if: runner.os == 'macOS'
run: |
brew install pkg-config
brew install udunits
brew install gdal
cat <<EOT >> .Renviron
PKG_CONFIG_PATH=/usr/local/lib/pkgconfig/
PROJ_LIB=/usr/local/opt/proj/share/proj/
# for installing XML package from source
XML_CONFIG=/usr/local/opt/libxml2/bin/xml2-config
EOT
cat <<EOT >> .Rprofile
r <- getOption("repos")
r["CRAN"] <- "https://cran.rstudio.com"
r["rccp_drat"] <- "https://RcppCore.github.io/drat"
config_args <- c("sf" = "--with-proj-lib=/usr/local/lib/", "rgdal" = "--with-proj-lib=/usr/local/lib/ --with-proj-include=/usr/local/include/")
options(configure.args = config_args,
install.packages.compile.from.source = "yes",
repos = r)
EOT
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
shell: Rscript {0}

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('depends.Rds') }}
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
# install spatial dependencies
sudo add-apt-repository ppa:ubuntugis/ubuntugis-unstable
sudo apt update
sudo apt install \
libudunits2-dev \
libgdal-dev \
libgeos-dev \
libproj-dev
- name: Install dependencies
run: |
library(remotes)
deps <- readRDS("depends.Rds")
deps[["installed"]] <- vapply(deps[["package"]], remotes:::local_sha, character(1))
update(deps)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}

- name: Install rgdal with configure
if: runner.os == 'macOS'
run: |
install.packages("rgdal", type = "source", configure.args = "--with-proj-lib=/usr/local/lib/ --with-proj-include=/usr/local/include/")
shell: Rscript {0}

- name: Check
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "${{ matrix.config.args }}"), error_on = "warning", check_dir = "check", build_args = "${{ matrix.config.build_args }}")
shell: Rscript {0}

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check

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