feat: add include and exclude cli options

[GLeurquin]

Solves part of #243

• Add --include <glob> and --exclude <glob> to the CLI to allow including and excluding specific files when passing directories via the CLI.
• This change is backwards compatible with the previous implementation.

Checklist

• Add test cases to all the changes you introduce
• Update the documentation for the changes

[coveralls]

Pull Request Test Coverage Report for Build 5267458260

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

• For more information on this, see Tracking coverage changes with pull request builds.
• To avoid this issue with future PRs, see these Recommended CI Configurations.
• For a quick fix, rebase this PR at GitHub. Your next report should be accurate.

Details

• 9 of 9 (100.0%) changed or added relevant lines in 1 file are covered.
• No unchanged relevant lines lost coverage.
• Overall coverage increased (+0.002%) to 99.795%

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Totals
Change from base Build 5093796074:	0.002%
Covered Lines:	487
Relevant Lines:	488

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💛 - Coveralls

[lyz-code]

Thanks for the contribution, it looks perfect

[lyz-code]

Available since 1.11.0