update to 2.3.3.

macmanes-lab · Apr 22, 2021 · 08b55fa · 08b55fa
1 parent 612feee
commit 08b55fa
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/docker_install.md b/docker_install.md
@@ -5,25 +5,25 @@
 
 
 ```
-docker pull macmaneslab/orp:2.2.6
+docker pull macmaneslab/orp:2.3.3
 ```
 
 \2. Alternatively, but probably not preferred, to build the image from scratch.
 
 ```
-docker build -t orp:2.2.6 -f $HOME/Oyster_River_Protocol/Dockerfile/Dockerfile .
+docker build -t orp:2.3.3 -f $HOME/Oyster_River_Protocol/Dockerfile/Dockerfile .
 ```
 
 \3. Run the Image
 
 ```
-docker run -it macmaneslab/orp:2.2.6 bash
+docker run -it macmaneslab/orp:2.3.3 bash
 
 #or with adding a drive, changing `/home/ubuntu/` to your mountpoint
 
 docker run -it \
  --mount type=bind,source=/home/ubuntu/,target=/home/orp/docker \
-macmaneslab/orp:2.2.6 bash
+macmaneslab/orp:2.3.3 bash
 
 ```
 
@@ -36,7 +36,7 @@ conda activate orp
 
 $HOME/Oyster_River_Protocol/oyster.mk \
 STRAND=RF \
-TPM_FILT=2 \
+TPM_FILT=1 \
 MEM=5 \
 CPU=4 \
 READ1=test.1.fq.gz \