Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

R: few updates and few new packages #19053

Merged
merged 12 commits into from Jun 11, 2023
10 changes: 5 additions & 5 deletions R/R-DelayedArray/Portfile
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github Bioconductor DelayedArray b7734e3210a8e0c1f9ef3c5d5566cf920e608255
version 0.27.4
R.setup github Bioconductor DelayedArray fce7a053d553d30b633878550fef89ae759e59f5
version 0.27.5
revision 0
categories-append devel
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license Artistic-2
description Unified framework for working transparently with on-disk and in-memory array-like datasets
long_description {*}${description}
checksums rmd160 c1967f3b4797f337836bd6beb8c88dad46fb6762 \
sha256 395eb80630e14b17542a2186a2a19dc8d001709945d973e1e02bd347ac1fdd5a \
size 147624
checksums rmd160 004f924e3be67339bc6aa03500f8828196cec215 \
sha256 318280a5d089488ec8b91b7904e63f8cd402aea41aba41a85e110f197c8ac97c \
size 147601

depends_lib-append port:R-BiocGenerics \
port:R-IRanges \
Expand Down
8 changes: 4 additions & 4 deletions R/R-RSQLite/Portfile
Expand Up @@ -3,16 +3,16 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github r-dbi RSQLite 2.3.1.9002 v
R.setup github r-dbi RSQLite 2.3.1.9003 v
revision 0
categories-append databases
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license {LGPL-2.1 LGPL-3}
description SQLite interface for R
long_description {*}${description}
checksums rmd160 5c292af0195127fe4108beb604afcbbb3d24a8f0 \
sha256 bc002bf3a652f6026316dd91ca27f516076e34c2f6d89fb9301f99529d6f7f66 \
size 4131032
checksums rmd160 14520c3312a70314a44ff22d0396fa1d7faf1d6b \
sha256 8dc000650455acfa0baa3803b88be25b68489f6e0c80739d1cef79005cda303f \
size 4129531

depends_lib-append port:R-bit64 \
port:R-blob \
Expand Down
10 changes: 5 additions & 5 deletions R/R-SparseArray/Portfile
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github Bioconductor SparseArray f9a1e5ceea3fcd4da4c41e6763d4770775efa9ac
version 1.1.9
R.setup github Bioconductor SparseArray 50ec590f912aa29a97d02f39754bff9e31958d18
version 1.1.10
revision 0
categories-append devel
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license Artistic-2
description Efficient in-memory representation of multi-dimensional sparse arrays
long_description {*}${description}
checksums rmd160 f47a799d14c15a7b47379f22c4858205a44e70bc \
sha256 a9511b41b1a5eb764dee93a53d881b0d499cf8764a1bed9e83c54b8205631038 \
size 137215
checksums rmd160 47cd10e7347d86f5947db5e4fbf160bb930de4a2 \
sha256 4865c031c2908f1e100606487485e76436ef7fa3cdcfc2bf8c88d06d863c8f6d \
size 139193

depends_lib-append port:R-BiocGenerics \
port:R-IRanges \
Expand Down
25 changes: 25 additions & 0 deletions R/R-clusterSim/Portfile
@@ -0,0 +1,25 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran cran clusterSim 0.51-3
revision 0
categories-append math
maintainers nomaintainer
license GPL-2+
description Search for an optimal clustering procedure for a data set
long_description {*}${description}
homepage http://keii.ue.wroc.pl/clusterSim
checksums rmd160 ec3025ffc0243f204d6e62f4b68a852492aab5e9 \
sha256 01997dd2df58075c3791bbf3bd9245bbc40424c72ade2f194f7238004eca9a72 \
size 3443612

depends_lib-append port:R-ade4 \
port:R-e1071 \
port:R-R2HTML

depends_test-append port:R-mlbench \
port:R-testthat

test.run yes
8 changes: 4 additions & 4 deletions R/R-cvms/Portfile
Expand Up @@ -3,15 +3,15 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github ludvigolsen cvms 1.4.0 v
R.setup github ludvigolsen cvms 1.4.1 v
revision 0
maintainers nomaintainer
license MIT
description Cross-validation for model selection
long_description {*}${description}
checksums rmd160 4016e2848011cab89f31756d90da10c460b33479 \
sha256 0a6f6d83c5dd063e92739c31408828398944de97d89c6ee94b67b5b2e59f046e \
size 2978096
checksums rmd160 5c74f331df9acfb5c3c2688c48540394cbb074e4 \
sha256 9ad51935e8c1404089c4b60af5ddd2dbd826b8206b8d8f0b1530c033509ffe89 \
size 2978648
supported_archs noarch

depends_lib-append port:R-checkmate \
Expand Down
10 changes: 5 additions & 5 deletions R/R-gargle/Portfile
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github r-lib gargle 1.4.0 v
revision 1
R.setup github r-lib gargle 1.5.0 v
revision 0
categories-append devel
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license MIT
description Manage the life cycle of your exported functions and arguments.
long_description {*}${description}
homepage https://gargle.r-lib.org
checksums rmd160 2867d87f878a99ec6f21be962632f2e72d4cd4d7 \
sha256 9d0c1e067d162fce5457eb97e4ebd1d711f74c7fb57fcf12fee8a605c2c84a42 \
size 455287
checksums rmd160 4d50676ab1f7af217fb205cb8314f6798d3c84ba \
sha256 f8b4e2e0818fcf0725d302d754c462a41fa2a955b150342fbc313a22e3865bdc \
size 471465
supported_archs noarch

depends_lib-append port:R-cli \
Expand Down
9 changes: 5 additions & 4 deletions R/R-ggeffects/Portfile
Expand Up @@ -3,16 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github strengejacke ggeffects 1.2.2 v
# Revert to GitHub once updated there.
R.setup cran strengejacke ggeffects 1.2.3
revision 0
maintainers nomaintainer
license GPL-3
description Create tidy data frames of marginal effects for ggplot from model outputs.
long_description {*}${description}
homepage https://strengejacke.github.io/ggeffects
checksums rmd160 dac9f3f0e5c5b220d08d1594323649cfa2c1de37 \
sha256 34bbece97f9e80747ab437e3de030a73d5a034fefa7a61b0fbed640520e992e5 \
size 448380
checksums rmd160 737b0dbbe42df859a3a0ab75ec740feba2ec6ba7 \
sha256 13a6eef6d4a9a1a78af7aa47c9575ec11781affd6cfedceb60fada80456ca98e \
size 284143
supported_archs noarch

depends_lib-append port:R-insight
18 changes: 9 additions & 9 deletions R/R-googlesheets4/Portfile
Expand Up @@ -3,16 +3,16 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github tidyverse googlesheets4 1.1.0 v
revision 1
R.setup github tidyverse googlesheets4 1.1.1 v
revision 0
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license MIT
description Access Google Sheets using the Sheets API V4
long_description {*}${description}
homepage https://googlesheets4.tidyverse.org
checksums rmd160 352571bb2dd3e799c8213a7148081f7ea855d1b0 \
sha256 219a94016a0879761f62f037e2078c8ba58bb400147e3f61968b6971880800fa \
size 2030763
checksums rmd160 c87110bdc39945bc568003872d0b0a3d3f1ce9b6 \
sha256 8182dde24ed10dc1b5fbaf8c7d7baaa6c7c9f389fa1fe3355080aeb6ca93e83f \
size 2034708
supported_archs noarch

depends_lib-append port:R-cellranger \
Expand All @@ -23,17 +23,17 @@ depends_lib-append port:R-cellranger \
port:R-googledrive \
port:R-httr \
port:R-ids \
port:R-lifecycle \
port:R-magrittr \
port:R-purrr \
port:R-rematch2 \
port:R-rlang \
port:R-tibble \
port:R-vctrs
port:R-vctrs \
port:R-withr

depends_test-append port:R-covr \
port:R-readr \
depends_test-append port:R-readr \
port:R-rmarkdown \
port:R-sodium \
port:R-spelling \
port:R-testthat

Expand Down
19 changes: 19 additions & 0 deletions R/R-jointDiag/Portfile
@@ -0,0 +1,19 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran gouypailler jointDiag 0.4
revision 0
categories-append math
maintainers nomaintainer
license GPL-2+
description Joint approximate diagonalization of a set of square matrices
long_description {*}${description}
checksums rmd160 542a062d73d577128b2c23dae04292504d482293 \
sha256 2e1b7c705bdd7b8598edb1b36e6e30b830ed9655545697cd65307dd855cfa6a3 \
size 10191

compilers.setup require_fortran

test.run yes
25 changes: 25 additions & 0 deletions R/R-morpheus/Portfile
@@ -0,0 +1,25 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran yagu0 morpheus 1.0-4
revision 0
categories-append math
maintainers nomaintainer
license MIT
description Estimate parameters of mixtures of logistic regressions
long_description {*}${description}
checksums rmd160 1b4e586441f72f52de2bfb68e3df0f3f7cf61770 \
sha256 c7c37c7b8d0132cc1e14f21ae95ae305aa085db81bc020c185cf1fa473ad3179 \
size 30118

depends_lib-append port:R-jointDiag \
port:R-pracma

depends_test-append port:R-devtools \
port:R-flexmix \
port:R-roxygen2 \
port:R-testthat

test.run yes
19 changes: 19 additions & 0 deletions R/R-rTensor/Portfile
@@ -0,0 +1,19 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup github rikenbit rTensor 1.4.8 v
revision 0
categories-append math
maintainers nomaintainer
license GPL-2+
description Tools for tensor analysis and decomposition
long_description {*}${description}
homepage https://jamesyili.github.io/rTensor
checksums rmd160 0228c7184e82f5dd076d268b15e6a9ccf5eacda6 \
sha256 ce15b4239a7fc05ea902cf3e2a8738e735306e6ab243b5c14ef216225edd8247 \
size 33316
supported_archs noarch

test.run yes
23 changes: 23 additions & 0 deletions R/R-usedist/Portfile
@@ -0,0 +1,23 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran cran usedist 0.4.0
revision 0
categories-append math
maintainers nomaintainer
license GPL-3
description Distance matrix utilities
long_description {*}${description}
checksums rmd160 a62f2a8904c2d9561b9542adeb93832f7f1e4a1f \
sha256 72a2e8b08e575b5ee50d8baf3009fbce843efe6f33e58a4712362faad80fae35 \
size 31701
supported_archs noarch

depends_test-append port:R-dplyr \
port:R-testthat \
port:R-tibble \
port:R-tidyr

test.run yes