build fixes

.travis.yml

@@ -3,9 +3,13 @@ os:
   - osx
   - linux
 julia:
+  - nightly
   - 0.4
+  - 0.5
 notifications:
   email: false
 script:
   - if [[ -a .git/shallow ]]; then git fetch --unshallow; fi
-  - julia -e 'Pkg.clone(pwd()); ENV["PYTHON"]=""; import Conda; Conda.add("yaml"); Pkg.build("Mads"); Pkg.test("Mads")';
+  - julia -e 'Pkg.clone(pwd()); ENV["PYTHON"]=""; import Conda; Conda.add("yaml"); Pkg.build("Mads"); Pkg.test("Mads")';
+after_success:
+  - julia -e 'cd(Pkg.dir("Mads")); Pkg.add("Coverage"); using Coverage; Coveralls.submit(Coveralls.process_folder())';  

EXAMPLES.md

@@ -0,0 +1,22 @@
+MADS examples
+=============
+
+In Julia REPL, do the following commands:
+
+`import Mads`
+
+To explore getting-started instructions, execute:
+
+`Mads.help()`
+
+There are various examples located in the `examples` directory of the `Mads` repository.
+
+For example, execute
+
+`include(Mads.madsdir * "/../examples/contamination/analysis.jl")`
+
+to perform various analyses related to contaminant transport, or execute
+
+`include(Mads.madsdir * "/../examples/bigdt/bigdt.jl")`
+
+to perform BIG-DT analysis.

INSTALLATION.md

@@ -0,0 +1,45 @@
+Installation
+============
+
+After starting Julia, execute:
+
+```
+Pkg.add("Mads")
+```
+
+Installation of MADS behind a firewall
+------------------------------
+
+Julia uses git for package management. Add in the `.gitconfig` file in your home directory:
+
+```
+[url "https://"]
+        insteadOf = git://
+```
+
+or execute:
+
+```
+git config --global url."https://".insteadOf git://
+```
+
+Set proxies:
+
+```
+export ftp_proxy=http://proxyout.<your_site>:8080
+export rsync_proxy=http://proxyout.<your_site>:8080
+export http_proxy=http://proxyout.<your_site>:8080
+export https_proxy=http://proxyout.<your_site>:8080
+export no_proxy=.<your_site>
+```
+
+For example, if you are doing this at LANL, you will need to execute the 
+following lines in your bash command-line environment:
+
+```
+export ftp_proxy=http://proxyout.lanl.gov:8080
+export rsync_proxy=http://proxyout.lanl.gov:8080
+export http_proxy=http://proxyout.lanl.gov:8080
+export https_proxy=http://proxyout.lanl.gov:8080
+export no_proxy=.lanl.gov
+```

MADS.md

@@ -26,4 +26,12 @@ For additional information:
 * git:
     - `git clone git@github.com:madsjulia/Mads.jl`
     - `git clone git@gitlab.com:mads/Mads.jl`
-* email: [mads@lanl.gov](mads@lanl.gov)
+* email: [mads@lanl.gov](mads@lanl.gov)
+
+[![Mads](http://pkg.julialang.org/badges/Mads_0.4.svg)](http://pkg.julialang.org/?pkg=Mads&ver=0.4) [![Mads](http://pkg.julialang.org/badges/Mads_0.5.svg)](http://pkg.julialang.org/?pkg=Mads&ver=0.5)
+
+[![Build Status](https://travis-ci.org/madsjulia/Mads.jl.svg?branch=master)](https://travis-ci.org/madsjulia/Mads.jl)
+
+[![Coverage Status](https://coveralls.io/repos/madsjulia/Mads.jl/badge.svg?branch=master)](https://coveralls.io/r/madsjulia/Mads.jl?branch=master)
+
+

README.md

@@ -1,10 +1,12 @@
 MADS (Model Analysis & Decision Support)
 =======================================
 
-[![Mads](http://pkg.julialang.org/badges/Mads_0.4.svg)](http://pkg.julialang.org/?pkg=Mads&ver=0.4)
+[![Mads](http://pkg.julialang.org/badges/Mads_0.4.svg)](http://pkg.julialang.org/?pkg=Mads&ver=0.4) [![Mads](http://pkg.julialang.org/badges/Mads_0.5.svg)](http://pkg.julialang.org/?pkg=Mads&ver=0.5)
 
 [![Build Status](https://travis-ci.org/madsjulia/Mads.jl.svg?branch=master)](https://travis-ci.org/madsjulia/Mads.jl)
 
+[![Coverage Status](https://coveralls.io/repos/madsjulia/Mads.jl/badge.svg?branch=master)](https://coveralls.io/r/madsjulia/Mads.jl?branch=master)
+
 MADS is an open-source [Julia](http://julialang.org) code designed as an integrated high-performance computational framework performing a wide range of model-based analyses:
 
 * Sensitivity Analysis

deps/build.jl

@@ -1,4 +1,6 @@
 info("Python YAML ...")
 import Conda
 ENV["PYTHON"]=""
-Conda.add("yaml")
+Conda.add("yaml")
+info("Rebuild PyCall ...")
+Pkg.build("PyCall")