megfield

a transformer neural field model for MEG data. kind of messy right now.

preprocessing

Using Brainstorm, the MEG data for HCP used scripts

megfield_pp0_new_subject.m - create subject and populate with
- anatomy
- BEM surfaces
- raw MEG files
megfield_pp1_noise_cov.m - noise cov
- compute noise covariance with Rnoise run
megfield_pp2.m processes the runs
megfiedl_pp3.m exports the runs
meg-prep-rewrite.ipynb
- downloads the data for the brainstorm functions
- runs postprocessing to put data into mode space

Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
brainstorm3-template-folders		brainstorm3-template-folders
README.md		README.md
badchan.py		badchan.py
badchans2.json		badchans2.json
compute-gdist.py		compute-gdist.py
compute-pgains.py		compute-pgains.py
convert_npz_npy.py		convert_npz_npy.py
dosomemore.m		dosomemore.m
find_meg_ids.sh		find_meg_ids.sh
friedchicken.png		friedchicken.png
get-diff-data.sh		get-diff-data.sh
get-meg-data.sh		get-meg-data.sh
hcp-meg-ids.txt		hcp-meg-ids.txt
meg-prep-rewrite.ipynb		meg-prep-rewrite.ipynb
megdata.py		megdata.py
megfield_pp0_new_subject.m		megfield_pp0_new_subject.m
megfield_pp1_noise_cov.m		megfield_pp1_noise_cov.m
megfield_pp2_clean_and_gain.m		megfield_pp2_clean_and_gain.m
megfield_pp3_convert_all_runs.m		megfield_pp3_convert_all_runs.m
megmodes-export.py		megmodes-export.py
model1.py		model1.py
prep-runs.py		prep-runs.py
run-diff.sh		run-diff.sh
rwkv.ipynb		rwkv.ipynb
rwkv100.py		rwkv100.py